| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4482 |
|---|
| Symbol | |
|---|
| ID | 3907458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 5352440 |
|---|
| End bp | 5352883 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637881814 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483557 |
|---|
| Protein GI | 86743157 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02935] probable nitrogen fixation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.995501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA AGACCGGTTT CCTCGGCGAC CTGGTCGACC AGCTGCGCGC CGGGGACACC
TACGGCCAAC TGGAACGGTT CTCCGACGAG GACCTGCTCC GCCCGTTCAT CGTCACGCGG
GAGCAGCGCC GCGAGATCGC GGTGAACTGC GACATCGACG CCGCCGTAGA GGGCCGGGTG
CGCTCCTTTT ACCAGGCGGT CGCGGCGGCC ACCGAGAAGG CGACCGGGGC GTTCACCACC
ACCGTGCTCG ACCTCAGCCA CGAGGGGTTC GGGCGCGTGA TCATTTGTGC CGGGCGGCTC
GTCGTCCTCT CCGACGCGCT GCGGGACGTG CAGCGGTTCG GCTTCGGCTC CATGGACGAG
CTCTCCGCCC GGGGCGAGTC GCTGGTGACC GGCGCGACCA AGCAGATCGA ACGATGGAAC
GAGGTGGCCC GCGATGACTC CTGA
|
|---|
| Protein sequence | MTAKTGFLGD LVDQLRAGDT YGQLERFSDE DLLRPFIVTR EQRREIAVNC DIDAAVEGRV
RSFYQAVAAA TEKATGAFTT TVLDLSHEGF GRVIICAGRL VVLSDALRDV QRFGFGSMDE
LSARGESLVT GATKQIERWN EVARDDS
|
|---|
| |