| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4478 |
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| Symbol | |
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| ID | 3907454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5349796 |
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| End bp | 5351379 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881810 |
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| Product | nitrogenase cofactor biosynthesis protein NifB |
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| Protein accession | YP_483553 |
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| Protein GI | 86743153 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0277889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCAA CCCCCGTCAG CCTGCCGATG CTGCCCACCG ACCCGGCAGG CGAGATGCCC
CGGCAGGCCA CCGGGCCGGC GCCCGACACC GCCGCCGGCT GCGCGAGCAA GTCCAGCTGT
GGCACCAGCG CTCCGGTGCG GGACCCGGAG ATCGCGGAGA AGATCGCCAA TCATCCCTGT
TACAGCGCCG AGGCCCACCA GTACTACGCC CGGATGCACG TGGCGGTCGC CCCAGGTTGC
AACATCCAGT GCAACTACTG CAACCGCAAG TTCGACTGCG CCAACGAGAG CCGTCCCGGC
GTCACCAGCA CCCTGCTGTC CCCCGAGGAC GCCCTCGCCA AGGTCAAGCT GGTGGCCAGC
GAGATCAAGC AGATGAGCGT GCTGGGGATC GCCGGCCCCG GCGACCCGCT GGCGAACCCG
AAGCCGACCT TCCGGACGAT GGAACTGGTG GCCCGGGACT GCCCGGACAT CAAGCTCTGC
CTGTCTACCA ACGGGCTGAC CCTGCCGGAC CACGTCGACC GCATCGCCGA ACTGAACGTC
GACCACGTCA CCATCACGAT CAACATGATC GACCCCGAGG TCGGGGAGCG GATCTACCCG
TGGATCGCCT TCCGCGGTAA GCGGTACACC GGCCGGGAGG CGTCCCGGAT CCTCTCCGAG
CGTCAGCTCG AGGGCCTGGC GATGCTCACC GAGCGGAAGA TTCTCTGCAA GGTCAACTCG
GTGATGATCC CCGGGATCAA CGATGACCAC CTCGTCGAGG TCTCCCGGAA GGTCAAGGAG
CTCGGCGCCT TCCTGCACAA CGTGATGCCG CTGGTGTCGG CGCCCGAGCA CGGCACCCAC
TTCGGCCTGA CCGGGCAGCG CGGCCCCACC CCACAGGAGC TCAAGGCGCT GCAGGACCGC
TGCGAGCAGG ACGACGGCGC CGAGATGAAC ATGATGCGGC ACTGCCGGCA GTGCCGCGCC
GACGCCGTCG GCCTGCTCGG TGAGGACCGG GGTGAGGAGT TCACTCCCGA GGCGTTCCGT
GGCCGTGAGA TCGAATACGA CCTCGAAGGC CGCCGGCAGA CGCATAGCGA GATCGAACGG
TGGCGCTCCG AGGTGGCTGC CACCCGGGGA GCGCTGAACA TCTCGACCGG CGCGGTCATT
CCCTCTGGCC CGGGCGCATC CCCCGATGAG GGCACCCCGG CCGGGGCCCG CCCGGGGAAC
GCCCGCCCGG AGAACGTCGT GCTCGTCGCT GTAGCGACCA AGGGCAGCGG CGTGGTGAAC
CAGCACTTCG GTCACGCGAC CGAGTTCTGG ATCTACGAGG GGGGTCCGGG CTGGGCCCGG
CTCGTGCAGA CCCGCGACGT GGACCGCTAC TGCAACGGCC CGTCGGACTG CGACGAGGAC
GCCTCCAAGC TCGACAAGAC GGTCGCGATG CTGTCCGACT GCGCGGCGGT GTTGTGCAGC
AAGATCGGCC TCGGGCCGCG CGAGGCGCTC GAGAATGCCG GGATCGAACC GGTGGAGCTC
TACGACCTGA TCGAGAAGGC GGTGGCCGAG GTCGGCTCCC GCCTTGTCGC ACATCGTGCC
GAAGCGGAGG TTGCCGTCCG ATGA
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| Protein sequence | MKATPVSLPM LPTDPAGEMP RQATGPAPDT AAGCASKSSC GTSAPVRDPE IAEKIANHPC
YSAEAHQYYA RMHVAVAPGC NIQCNYCNRK FDCANESRPG VTSTLLSPED ALAKVKLVAS
EIKQMSVLGI AGPGDPLANP KPTFRTMELV ARDCPDIKLC LSTNGLTLPD HVDRIAELNV
DHVTITINMI DPEVGERIYP WIAFRGKRYT GREASRILSE RQLEGLAMLT ERKILCKVNS
VMIPGINDDH LVEVSRKVKE LGAFLHNVMP LVSAPEHGTH FGLTGQRGPT PQELKALQDR
CEQDDGAEMN MMRHCRQCRA DAVGLLGEDR GEEFTPEAFR GREIEYDLEG RRQTHSEIER
WRSEVAATRG ALNISTGAVI PSGPGASPDE GTPAGARPGN ARPENVVLVA VATKGSGVVN
QHFGHATEFW IYEGGPGWAR LVQTRDVDRY CNGPSDCDED ASKLDKTVAM LSDCAAVLCS
KIGLGPREAL ENAGIEPVEL YDLIEKAVAE VGSRLVAHRA EAEVAVR
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