Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4474 |
Symbol | |
ID | 3907450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5344828 |
End bp | 5346831 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637881806 |
Product | pyruvate flavodoxin/ferredoxin oxidoreductase-like |
Protein accession | YP_483549 |
Protein GI | 86743149 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0303552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACCG AACAGTTGTC CGAACGACCA GATCCGGGGG TCACGCAACT GGAACACGTG GTGATCCGTT TTGCCGGTGA CTCCGGCGAC GGGATGCAGC TCACCGGTGA CCGGTTCGGC GCCCAGGCCG CCGCGGGCGG CAACGACGTG GCAACGTTGC CGAACTACCC GGCGGAGATC CGGGCGCCAG CCGGAACCGT GGCCGGGGTG TCGAGCTACC AACTCCACAT CGCTGACCAC GACATCAGGA CCCCGGGCGA CCGGCCCGAC GTTCTGGTCG CCATGAACCC CGCGGCGCTC AGGGCGAACA TCGCCGAGCT GCGTCCCGGC GGGGTCCTGA TCGTGGACAC CGACGCGTTC ACGGTGATGG GCCTGGAAAA GGCCGGTTAC GAGGCCGATC CCCTGACCAA CGGGTCGCTG GACGCCTACC ACGTGCACGC GATCAACCTC ACCGGTCTCG CCGCCACGGC CGTCGCCGAG TTCAACCTGA AGCGCAAGGA CGCCGCCCGG ACGAAGAACA TGTTCGCGCT CGGCCTGGTG TCCTGGATGT TCAGTCAGCC CATCGAGGAC ACGATCGCCT ACCTGCAGAA GCGGTTCGCC GCGAAGCCGG ACGTGCAGGC CGCGAACATC GCCGCGCTGC GGGCCGGGTG GATCTACGGC GACACCACCG AGGCCTTCGC GCTCTCCTAC GAGGTGAAGC CGGCCAAGCT GCCCGCCGGC ACCTACCGGC ACATGAAGGG CAACAAGGCG ATCGCCTACG GCCTGGTCGC CGCCGCGCAG CAGGCCGGGA TGCCGCTGTT CCTCGGCGCC TACCCGATCA CTCCCGCCTC CGACATTCTG CACGAGCTGA GCGCGCTCGC CTCCTTCGAC GTGCGCTCCT TCCAGGCCGA GGACGAGATC GCCGCCATCG GTTCCGCGAT CGGCGCGTCC TTCGCCGGGA TGCTCGGCGT GACCGTCACC TCCGGTCCCG GGATGGCCCT GAAGACCGAG GCTCTCGGCC TTGCGGTGAT CATGGAGCTG CCGCTCGTTG TCGTCAACGT GCAGCGCGGC GGGCCGTCGA CCGGTCTGCC GACCAAGACC GAGCAGTCCG ACCTGCTCCA GGCCCTGTAC GGCCGGCACG GCGAGGCGCC GCTGCCGGTG ATCGCGGCGC GTTCGCCCGC GGACGGCTTC GACGCCGCGC TGGAGGCAGC CCGGATCGCG CTGGCCTACC GCACCCCGGT CATCCTGCTG TCCGACGCCT ACGTCGCCAA CGGCAGCGAG CCGTGGCGGG TGCCCGAGAC GGCGGAGCTG CCCACCATCG GGATCGATCT CGCCACCGGC CCGAACGGGG TGGACGAGGC CGGTAACCCG ATCTTCCTGC CGTACGTGCG GGACCCGATC ACGTTGGCCC GCCCGCTGGC GATCCCGGGT ACCCCGGGGC TCACGCACCG CATCGGCGGT CTGGAGAAGG CCGACTTGAC CGGTGCGGTC TCCTACGACC CCGACAACCA TGACCTGCTG GTCCGCACCC GACAGTCCAA GATCGATAAC ATCGACGTGC CGCTCCTGGA GGTCGATGAT CCCAGCGGGC CCCCCGGATC CGGCGCCGAT GTGCTGGTGA TCGGATGGGG CTCGACGTGG GGGCCGATCG GTGAAGCCTG CCGCCAGGTG CGGCGCGACG GCATGAAGGT CGCCCAGGCG CACCTGCGCC ATCTCGCCCC GCTGCCGGCG AACCTGGCCT CGGTGCTGTC GGAGTACCAC ACCGTGCTCG TCCCCGAGAT GAACCTCGGG CAGCTCGCCG GACTCCTGCG CCGGGAATGC CTGATCGACA CCGTCGGCTA CAACCAGACC CGCGGCATGC CGTTCCGGGT CGCCGAGCTT ACCTCCGTCA TCAGCCGGAT CATCCAGGGC ATCGACGAGG AGCCGTCGGC GGATGCGGCC TCGAAGCCGG TCGGGGACGT GAGCGCCCGG TTGAACGTAC ACCTTGGTTC GAAGCTCGGC ACGGCCGGGG AGGCAGGACG ATGA
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Protein sequence | MPTEQLSERP DPGVTQLEHV VIRFAGDSGD GMQLTGDRFG AQAAAGGNDV ATLPNYPAEI RAPAGTVAGV SSYQLHIADH DIRTPGDRPD VLVAMNPAAL RANIAELRPG GVLIVDTDAF TVMGLEKAGY EADPLTNGSL DAYHVHAINL TGLAATAVAE FNLKRKDAAR TKNMFALGLV SWMFSQPIED TIAYLQKRFA AKPDVQAANI AALRAGWIYG DTTEAFALSY EVKPAKLPAG TYRHMKGNKA IAYGLVAAAQ QAGMPLFLGA YPITPASDIL HELSALASFD VRSFQAEDEI AAIGSAIGAS FAGMLGVTVT SGPGMALKTE ALGLAVIMEL PLVVVNVQRG GPSTGLPTKT EQSDLLQALY GRHGEAPLPV IAARSPADGF DAALEAARIA LAYRTPVILL SDAYVANGSE PWRVPETAEL PTIGIDLATG PNGVDEAGNP IFLPYVRDPI TLARPLAIPG TPGLTHRIGG LEKADLTGAV SYDPDNHDLL VRTRQSKIDN IDVPLLEVDD PSGPPGSGAD VLVIGWGSTW GPIGEACRQV RRDGMKVAQA HLRHLAPLPA NLASVLSEYH TVLVPEMNLG QLAGLLRREC LIDTVGYNQT RGMPFRVAEL TSVISRIIQG IDEEPSADAA SKPVGDVSAR LNVHLGSKLG TAGEAGR
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