Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4446 |
Symbol | |
ID | 3907422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5313550 |
End bp | 5315301 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637881778 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_483521 |
Protein GI | 86743121 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGATT CCGGGTCGGA CGGCGGCTAT GACGCCGACG TGATCGTGAT CGGGAGCGGG TTCGGCGGCA GCGTCAGCGC GCTACGGCTC GCGGAGAAGG GCCATCGTGT CCTCGTGCTG GAGGCCGGTC GCCGGTTCAC CCCGGACACG CTGCCGAAGA ACAGCTGGCA CGTTCGCCGG TATCTGTGGA TGCCGCGGTT GGGCTGCCAC GGTATCCAGA AGATCACCTG GTTGGGTCGG GTCGTGGTGC TGTCCGGAAC GGCGGTCGGT GGCGGCTCGG TCGTCTACGC GAACACGCTG TACCGCCCGC TCGACGCCTT CTATACCGAC CCGCAGTGGC GGGACATCAC CGACTGGCGC CGTGAGCTGG AGCCGTTCTT CGACCAGGCC GAACGCATGC TCGGGGTGAA TCCCAACCCG ACGACGACGT ACTCCGACGA GGTGTTCCGC ACGGTCGCCG AGGAGATGCG GGTCGGGTCC ACCTTCGCGG CGGCGCCGGT CGGTGTCTTC TTCGGCCGCG ACGGCAGCCG GGAACCCGGC GTGCGTGTCC CTGACCCGTA CTTCGGCGGC GCCGGCCCGG CTCGGACGGG ATGCGTAGAG TGCGGGGAGT GCATGAGCGG CTGCCGTCGA GGGGCCAAGA ACACCCTCGA CTGTAACTAC CTGTACCTGG CCGAGCGGGC CGGTGTGCGG GTAGTCCCGG ACACCACGGT CACGGCTGTC CGGCCACGCT CGACCGGCGG GTATGAGCTC GACATGGTCC GGACGGGGGG TCTCGTCCGG CGTCGGCGAC GTACCCTCAC CGCGGAGCAG GTCGTGTTCG CCGCCGGCAC CCTGGGCACC CAGCGGCTGC TGCTGGCGAT GAAACAGAGC GGTGACCTGC CGGCGTTGTC CGACCGGCTC GGTCATCTCA CCCGGACGAA CTCCGAGGCG ATCCTGGGCG CATCCAGGCT GCGCCCCGAT CAGCGGATCG CCCGGGGAGT CGCGATCACC TCGTCCTTCC ACCCCGACGA GCACACCCAC ATCGAACCCG TGCGCTACGG CCGGGGGAGC AACCTGATGG CACTGATCAG CGCGTCGATG ACCGACGGCG GCGGGCGGGT GCCGCGCTGG CTGAAATACC TGCGTCAGGT CGTGCTCCAC CCACATCAGG CGCTGGCGTC GTCACTGCCC TGGCGATGGT CCGAGCGGAC CATCATTGCG CTGGTCATGC AGTCGTGGGA CAACTCGTTG ATCGTCTCCC TGCGCCGTGG GCCGTTCGGT CTCGGCTGGC TGACGAGTCG GCAGGGACAC GGTGAGCCGA ACCCCTCCTG GATCCCGGAG GGCAACGATG CCGCCCGCCG GATCGCGGCC AGGATGGGCG GCTACCCCGG CGGGTCGATC GGCGAGATCG CCAACATCCC GCTGACCGCG CACATCCTCG GCGGGGCCCC CATCGGCACG GATCCCACCA CCGGAGTGAT CGATCCCTAC CACCGGGTCT TCGGATACGA GGGGCTGCAC GTCGTCGACG GCGCCGCGGT CTCGGCGAAC CTCGGCGCGA ACCCGTCGTT GACCATCACT GCGCAGGCCG AACGGGCGAT GTCCTTCTGG CCGAACAAGG GGGAACCCGA CCCGCGCCCA CCTCTCGGGG CGGCCTACCG GCCGGTTGCG CCGAGAGCAC CGGCGCACCC CGCCGTCCCA GCCGGCGCTC CCGGGACCTA CCGCGTGGTC GGCCCGGTCG GCCCGGTCGG ACCGGTCGCG GGGACGAGGT GA
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Protein sequence | MADSGSDGGY DADVIVIGSG FGGSVSALRL AEKGHRVLVL EAGRRFTPDT LPKNSWHVRR YLWMPRLGCH GIQKITWLGR VVVLSGTAVG GGSVVYANTL YRPLDAFYTD PQWRDITDWR RELEPFFDQA ERMLGVNPNP TTTYSDEVFR TVAEEMRVGS TFAAAPVGVF FGRDGSREPG VRVPDPYFGG AGPARTGCVE CGECMSGCRR GAKNTLDCNY LYLAERAGVR VVPDTTVTAV RPRSTGGYEL DMVRTGGLVR RRRRTLTAEQ VVFAAGTLGT QRLLLAMKQS GDLPALSDRL GHLTRTNSEA ILGASRLRPD QRIARGVAIT SSFHPDEHTH IEPVRYGRGS NLMALISASM TDGGGRVPRW LKYLRQVVLH PHQALASSLP WRWSERTIIA LVMQSWDNSL IVSLRRGPFG LGWLTSRQGH GEPNPSWIPE GNDAARRIAA RMGGYPGGSI GEIANIPLTA HILGGAPIGT DPTTGVIDPY HRVFGYEGLH VVDGAAVSAN LGANPSLTIT AQAERAMSFW PNKGEPDPRP PLGAAYRPVA PRAPAHPAVP AGAPGTYRVV GPVGPVGPVA GTR
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