Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4434 |
Symbol | |
ID | 3907410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5300115 |
End bp | 5301557 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637881766 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_483509 |
Protein GI | 86743109 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.367833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCA CGGTGCGCAA GGTCGCCGTC GTCTGCATGG TCCTCTTCGC CGCGCTCCTG GTGAACGCGA ACTGGCTCCA GGTGGGCGAG GCGGGCAGCC TCAAGTCCCA GCCGACGAAC GGGCGTCAGA TCACCGAGCG CCTGGAACGA CAGCGGGGCG CGATCGTCGC CGGTGACGTG GAGATCGCAC GTTCGGTGCC GTCGAACGAC CAGTACAAGT ACCAGCGGCA GTATCCGGCC GGGCAGCTCT ACTCCAACGT TACCGGCTAC TACACGCTGT TCACGGCGGC CGGCCTGGAG CGGTCCGAGG ACGTCTTCCT GTCCGGAGAC GACGACCGAC TGCTCGCAAG CCGGGTGACC GGCCTGTTCA CCGGCGCGGA GCGGCGCGGC GGTTCCGTGG TCACCACGAT CAACCCCGCC GTCCAGAAGG CGGCGGCGGA GGCGCTCGGC AACCGCAAGG GCGCGGTGGT CGCCATCGAG CCGTCGACCG GCGCGATCCT GGCGATGGTC ACCAACCCTT CCTACGACGC GAACGCGCTG GCGGCCCATG ATGAGAAGGC CGCGGCCAAT GCCTATGGGC TGCTGTCGGG CAATCCAGAT CAACCGCTGC TGAACCGGGC AGCCCAGCAG ACCTATCCGC CCGGTTCGAC CTTCAAGCTC ATCACCGCCG CCGCCGCGCT GTCACAAGGC AGGACGCCGG ACACTCGTGT CGCGGCACCC GATGAGCTAC CGCTCCCACT GAGCACCGTG CGGCTGCCGA ACTTCGGCGG CGAACGCTGC GGCGACGGCG AGACCGACAC CCTCATTCAC GCGCTCGCCA TCTCCTGCAA CACCGCGTTC GCACAGCTCG GTATCGATCT CGGTGCCGAC ACCCTGCGCC GGCAGGCCGA GGCCTTCGGC CTGAACGCGA CCTTCCCCGA CTTCCCCTTG CAGCAGGCCC GTAGCGTCTT CCCCGCCAAG CTCGACGCCG CGCAGACCGC GCAGTCGGCG ATCGGCCAGT ACGACGTCCG GGTCACGCCC CTACAGATGG CGGAGGTGGT CGCGGCGATC GCCAACGACG GCACGGAGAT GAAGCCCTAT ATCGTGTCCG AACTACGCAG CCCGGACCTC AAGAGGATCA GCAAAACCGA GCCGAAGAAA CTCGGTGAAC CGGTGAGCAG CGAGGTGGCC GCCCAGCTCA CGACCATGAT GGAAAGCGTG GTGACGTCGG GGACCGGTCG GCGGGCGCAG ATCGGCGGCG TCACCGTCGC CGGGAAGACG GGGACCGCCG AGCACGGCAC CAGCCTGCCG CACGCCTGGT TCGTGGGGTT CGCCCCGGCG GACGCTCCGA AGATCGCGGT TGCCGTCATC GTCGAGGACG GCGGCGGCGA GCTGGGTACC GGTGGTGCCG TCGCCGCCCC CGTCGCGAAA CAGGTCATAC AGGCCGCATT GGACAAGCCA TGA
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Protein sequence | MNRTVRKVAV VCMVLFAALL VNANWLQVGE AGSLKSQPTN GRQITERLER QRGAIVAGDV EIARSVPSND QYKYQRQYPA GQLYSNVTGY YTLFTAAGLE RSEDVFLSGD DDRLLASRVT GLFTGAERRG GSVVTTINPA VQKAAAEALG NRKGAVVAIE PSTGAILAMV TNPSYDANAL AAHDEKAAAN AYGLLSGNPD QPLLNRAAQQ TYPPGSTFKL ITAAAALSQG RTPDTRVAAP DELPLPLSTV RLPNFGGERC GDGETDTLIH ALAISCNTAF AQLGIDLGAD TLRRQAEAFG LNATFPDFPL QQARSVFPAK LDAAQTAQSA IGQYDVRVTP LQMAEVVAAI ANDGTEMKPY IVSELRSPDL KRISKTEPKK LGEPVSSEVA AQLTTMMESV VTSGTGRRAQ IGGVTVAGKT GTAEHGTSLP HAWFVGFAPA DAPKIAVAVI VEDGGGELGT GGAVAAPVAK QVIQAALDKP
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