Gene Francci3_4434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4434 
Symbol 
ID3907410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5300115 
End bp5301557 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content68% 
IMG OID637881766 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_483509 
Protein GI86743109 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.367833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA CGGTGCGCAA GGTCGCCGTC GTCTGCATGG TCCTCTTCGC CGCGCTCCTG 
GTGAACGCGA ACTGGCTCCA GGTGGGCGAG GCGGGCAGCC TCAAGTCCCA GCCGACGAAC
GGGCGTCAGA TCACCGAGCG CCTGGAACGA CAGCGGGGCG CGATCGTCGC CGGTGACGTG
GAGATCGCAC GTTCGGTGCC GTCGAACGAC CAGTACAAGT ACCAGCGGCA GTATCCGGCC
GGGCAGCTCT ACTCCAACGT TACCGGCTAC TACACGCTGT TCACGGCGGC CGGCCTGGAG
CGGTCCGAGG ACGTCTTCCT GTCCGGAGAC GACGACCGAC TGCTCGCAAG CCGGGTGACC
GGCCTGTTCA CCGGCGCGGA GCGGCGCGGC GGTTCCGTGG TCACCACGAT CAACCCCGCC
GTCCAGAAGG CGGCGGCGGA GGCGCTCGGC AACCGCAAGG GCGCGGTGGT CGCCATCGAG
CCGTCGACCG GCGCGATCCT GGCGATGGTC ACCAACCCTT CCTACGACGC GAACGCGCTG
GCGGCCCATG ATGAGAAGGC CGCGGCCAAT GCCTATGGGC TGCTGTCGGG CAATCCAGAT
CAACCGCTGC TGAACCGGGC AGCCCAGCAG ACCTATCCGC CCGGTTCGAC CTTCAAGCTC
ATCACCGCCG CCGCCGCGCT GTCACAAGGC AGGACGCCGG ACACTCGTGT CGCGGCACCC
GATGAGCTAC CGCTCCCACT GAGCACCGTG CGGCTGCCGA ACTTCGGCGG CGAACGCTGC
GGCGACGGCG AGACCGACAC CCTCATTCAC GCGCTCGCCA TCTCCTGCAA CACCGCGTTC
GCACAGCTCG GTATCGATCT CGGTGCCGAC ACCCTGCGCC GGCAGGCCGA GGCCTTCGGC
CTGAACGCGA CCTTCCCCGA CTTCCCCTTG CAGCAGGCCC GTAGCGTCTT CCCCGCCAAG
CTCGACGCCG CGCAGACCGC GCAGTCGGCG ATCGGCCAGT ACGACGTCCG GGTCACGCCC
CTACAGATGG CGGAGGTGGT CGCGGCGATC GCCAACGACG GCACGGAGAT GAAGCCCTAT
ATCGTGTCCG AACTACGCAG CCCGGACCTC AAGAGGATCA GCAAAACCGA GCCGAAGAAA
CTCGGTGAAC CGGTGAGCAG CGAGGTGGCC GCCCAGCTCA CGACCATGAT GGAAAGCGTG
GTGACGTCGG GGACCGGTCG GCGGGCGCAG ATCGGCGGCG TCACCGTCGC CGGGAAGACG
GGGACCGCCG AGCACGGCAC CAGCCTGCCG CACGCCTGGT TCGTGGGGTT CGCCCCGGCG
GACGCTCCGA AGATCGCGGT TGCCGTCATC GTCGAGGACG GCGGCGGCGA GCTGGGTACC
GGTGGTGCCG TCGCCGCCCC CGTCGCGAAA CAGGTCATAC AGGCCGCATT GGACAAGCCA
TGA
 
Protein sequence
MNRTVRKVAV VCMVLFAALL VNANWLQVGE AGSLKSQPTN GRQITERLER QRGAIVAGDV 
EIARSVPSND QYKYQRQYPA GQLYSNVTGY YTLFTAAGLE RSEDVFLSGD DDRLLASRVT
GLFTGAERRG GSVVTTINPA VQKAAAEALG NRKGAVVAIE PSTGAILAMV TNPSYDANAL
AAHDEKAAAN AYGLLSGNPD QPLLNRAAQQ TYPPGSTFKL ITAAAALSQG RTPDTRVAAP
DELPLPLSTV RLPNFGGERC GDGETDTLIH ALAISCNTAF AQLGIDLGAD TLRRQAEAFG
LNATFPDFPL QQARSVFPAK LDAAQTAQSA IGQYDVRVTP LQMAEVVAAI ANDGTEMKPY
IVSELRSPDL KRISKTEPKK LGEPVSSEVA AQLTTMMESV VTSGTGRRAQ IGGVTVAGKT
GTAEHGTSLP HAWFVGFAPA DAPKIAVAVI VEDGGGELGT GGAVAAPVAK QVIQAALDKP