Gene Francci3_4410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4410 
Symbol 
ID3907385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5272121 
End bp5273065 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content74% 
IMG OID637881741 
Productaminoglycoside phosphotransferase 
Protein accessionYP_483485 
Protein GI86743085 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0362024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACG GCGGGCACCC TCCGGCGGGC TCGCCGGACC ACGCGCGGTT CACCGCGGAG 
CGGACCCGCC GCGCCCTCGG TGCGATCTGC GCCGAGGCCG GCCTGGACGA CTCGGATGCC
ATGCTGATCA AGAGAACCGT GAACGCGGTG TACCGGCTGC CACGGGCCGG CGCGGTTGTC
CGGATCATCG GATCGGCCGC GATGGCGCAT CGGGTGAACA AGGTGGTCCG GGTGGCCCGC
TGGCTGGCGG AGAACCACGT CCCGGCCGTC CGGCTGCTCC CCGGCGTGCC GGCCCCGGTC
ACGGCGGCCG GCTTCCTCGC GACGGTCTGG GCCGACGCGA CGCCACCCGG CACCCCGCCC
GGCGGTCCGG CACCGGACAC CGCGGAGCTG GCCGGCGCGC TGCGCGGTCT GCACACCCTG
GCGCCGCCGG AACCGCCGCT GCCATGCTGG GATCCCCTCG ACGACGTCCG CCGGCGATTA
TCCGACGCCG AGGCGCTCCC CGGGCCCGAC CGCCGTTTCC TGGAGAAGAT GACCGGCCGG
ATCGCGGCGG CTCTGCCCAC CATCCGCTAC GCGCTGCCGC GGGTCGTCAT ACATGGGGAC
GCGCATCTGG CGAACCTCGT GCGGGCCGCG GACGGCCGCG CGCTGCTCTG CGACTTCGAC
GCCACCTGCC TGGGGCCGGC GGAATGGGAC CTGATTCCTG TGGCGGTCGG CCGGCTACGC
TTCGGTCATG ATCCTCAGGC CCACCTCGAT CTGGCCCGGG GCTACGACTT CGACGTCACC
ACCTGGGACG GGTTCGCCGT CCTGCGGGCG GTCCGGGAAC TGAAGCTGGT GACGAGCGTG
GTGCCGATCC TGGGGAGCAG CGCGACGGTG GCCGCCCAGT TCCGGGTCAG GATGGACAGC
CTGCGCTCCG GCGACACCGG CGTCCGCTGG TCCCCCTACC GTTGA
 
Protein sequence
MADGGHPPAG SPDHARFTAE RTRRALGAIC AEAGLDDSDA MLIKRTVNAV YRLPRAGAVV 
RIIGSAAMAH RVNKVVRVAR WLAENHVPAV RLLPGVPAPV TAAGFLATVW ADATPPGTPP
GGPAPDTAEL AGALRGLHTL APPEPPLPCW DPLDDVRRRL SDAEALPGPD RRFLEKMTGR
IAAALPTIRY ALPRVVIHGD AHLANLVRAA DGRALLCDFD ATCLGPAEWD LIPVAVGRLR
FGHDPQAHLD LARGYDFDVT TWDGFAVLRA VRELKLVTSV VPILGSSATV AAQFRVRMDS
LRSGDTGVRW SPYR