Gene Francci3_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4406 
Symbol 
ID3907381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5267541 
End bp5268008 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content70% 
IMG OID637881737 
Productdihydroneopterin aldolase 
Protein accessionYP_483481 
Protein GI86743081 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.114139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGCT CCGCAGCGGA GGTCGCCTCC CAATCGAGGG CCACGTCGCT CGACCGGATC 
ACCCTGTCGG GGCTGCGGGC TCGCGGCTAC CACGGGGTTC TGGCGGCGGA ACGGGATCTT
GGCCAGGAGT TCGTCGTCGA TGCCACGCTG TGGCTCGACC TCTCTTCGGC GGCGTTCCAC
GACGACGTGA CCCGCACCGT GCACTACGGC GAGCTTGCCG AGACCCTTGC CGGGATCGTC
ACCGGAGAAC CCGTGAATCT GATTGAGACC CTCGCCGATC GACTCGTCCG CGCCTGTCTG
CGGGACGGTC GGGTGATGCG GGCCGAGGTG ACTGTCCACA AGCCCGCGGC CCCGATCGCG
GTTCCGTTCG CCGATGTCGC GGTGACGATC GTCCGCAACC GGGTCGACGG CGTCGAGTCG
GTGACCGCGC CGGCCGCGGC CGCGGGGGTC GTCACCGATG GCGGGTGA
 
Protein sequence
MTGSAAEVAS QSRATSLDRI TLSGLRARGY HGVLAAERDL GQEFVVDATL WLDLSSAAFH 
DDVTRTVHYG ELAETLAGIV TGEPVNLIET LADRLVRACL RDGRVMRAEV TVHKPAAPIA
VPFADVAVTI VRNRVDGVES VTAPAAAAGV VTDGG