| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4397 |
|---|
| Symbol | |
|---|
| ID | 3907372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 5255296 |
|---|
| End bp | 5256573 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637881728 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_483472 |
|---|
| Protein GI | 86743072 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCG CGCCCGAGCG TGCCACCAGT CCCACCCTCG AGGTCGCGAA CCCCGCGGTC
TCGCTGTCCT GTCGGCACTG CGGCGCCACC TACCCGCTGT CCCCTACGCA TGTGTGCGTG
GAATGCTTCG CTCCTCTGGA AATCGCCTAC GACCCGGACC TGCTGGCTCG TGTGACCCGA
GAGTCCATCG AACGTGGTCC GGCGAACCTG TGGCGTTACG TCGGGCTGCT GCCCGCCGGG
CATGACCCGG CGCGGCGGGT CTCCCTCGGG GCCGGCTGGA CGCCACTGCG CCCGGCCCCG
AGGCTCGCCG CGGAGCTGGG GATGAAGACG CTCTATATCA AGGACGACAG CGCCAACCCC
ACCCACTCCT TCAAGGACCG GGTCGTCTCC GTGGCGCTCA CCGCCGCCCG TGAGCTGGGC
TTCACCACGG TCGCCTGCGC CTCGACGGGC AACCTCGCGC AGTCGGTGGC GGCGCACGCG
GCCGGTGCCG GGCTGCGCTC GGTGGTGCTC GTACCGCACG ACCTCGAGGC TGGCAAGACG
GTCTCCACCG GGGTGTACGG CGGGACGCTG GTCGCCATCC AGGGCAACTA CGACGACGTG
AACCGGTTGT GCAGCGAGCT GGCCGGAGAG TACGAATGGG CGTTCGTCAA CGTCAACGTC
CGCCCCTTCT ACGCCGAGGG ATCCAAGACG CTCGGCTACG AGGTCGCCGA GCAGCTCGGC
TGGCGGCTGC CCGAGCAGGT CGTCGTGCCG ATCGCCTCCG GTTCACTGCT AACAAAGATC
GACAAGGCCT TCGGTGAGCT CGGCCGGCTC GGCCTGGTCG AGCCGACGCC GTACAGGGTG
TTCGGTGCGC AGGCGGCCGG CTGCAACCCG GTGGCCGCCG CGTTCGCCCG CGGCGTCGAG
ACGGTCGCCC CGGTCCGGCC CGCCACAATC GCCAAGTCGC TGTCGATCGG CAACCCGGCC
GACGGCCCCT ACGCCCTCGA CGTGGCTCGG CGGACCGGCG GGGCTATCAC GGACGTGACC
GACGAGGAGA TCATCGACGG GATCCGGCTG CTCGCCCGCG CCGAGGGCGT CTTCGGCGAG
ACGGCCGGTG GCGTCACCGT GGCCACCCTG CGCAGGCTGC TGCGCGAGGG GCTGCTCGAC
CCGGCCGCCG AAACCGTCCT TTACAACACC GGCGATGGGC TGAAGACGCT CGACCCCCTC
GTCGAGACGG GCGGACCGAC CGCGACGATC AAGCCGTCGC TGCGCGCCTT CGAGGCCGCC
GGCCTCGGCG ACGACTGA
|
|---|
| Protein sequence | MTLAPERATS PTLEVANPAV SLSCRHCGAT YPLSPTHVCV ECFAPLEIAY DPDLLARVTR
ESIERGPANL WRYVGLLPAG HDPARRVSLG AGWTPLRPAP RLAAELGMKT LYIKDDSANP
THSFKDRVVS VALTAARELG FTTVACASTG NLAQSVAAHA AGAGLRSVVL VPHDLEAGKT
VSTGVYGGTL VAIQGNYDDV NRLCSELAGE YEWAFVNVNV RPFYAEGSKT LGYEVAEQLG
WRLPEQVVVP IASGSLLTKI DKAFGELGRL GLVEPTPYRV FGAQAAGCNP VAAAFARGVE
TVAPVRPATI AKSLSIGNPA DGPYALDVAR RTGGAITDVT DEEIIDGIRL LARAEGVFGE
TAGGVTVATL RRLLREGLLD PAAETVLYNT GDGLKTLDPL VETGGPTATI KPSLRAFEAA
GLGDD
|
|---|
| |