Gene Francci3_4357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4357 
Symbol 
ID3907329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5204587 
End bp5205072 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content72% 
IMG OID637881688 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_483432 
Protein GI86743032 
COG category[S] Function unknown 
COG ID[COG3402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.351657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACG CTCTTCTGCC GGATCCCGCG CAGTGGCGGG TCCTGCCACC GGGCCTACGG 
CGGCTTCGAC GGGCGCTCCT GATCGTGGGA GCCGTCCCGG TGGTGGCGCT CACCCTGCTG
ATCACGGCGG CGTTCGGCGG CTGGCCCTGG ATACTGATCA CGGTGGCGCC AATCCTCGTG
ACGGGCTGGC TCTGGCGCTC GATCGGCCTC CGCTGGCAGG CCTGGCGCTA TGCCGAGCGG
GAGGACGATC TCCTGATCAG CCGCGGGGTG CTGACGCGTC GCCTGATCGT GGTGCCGTAT
GGCCGGATGC AGCTCGTCGA CGTCACCGCC GGACCACTGG CGCGCCGCTT CGGCATCGCC
AAGGTGCAGC TGCACACCGC GGCCGCGGAC AGCGATGCCA TCATCCCCGG CCTGGCCCCG
GACGAGGCCG CGCGGCTGCG TGACGCGCTC ACCGAACGCG GTGAAGCCCG GTCGGCCGGG
CTGTGA
 
Protein sequence
MHDALLPDPA QWRVLPPGLR RLRRALLIVG AVPVVALTLL ITAAFGGWPW ILITVAPILV 
TGWLWRSIGL RWQAWRYAER EDDLLISRGV LTRRLIVVPY GRMQLVDVTA GPLARRFGIA
KVQLHTAAAD SDAIIPGLAP DEAARLRDAL TERGEARSAG L