Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4349 |
Symbol | dcd |
ID | 3907321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5192082 |
End bp | 5192681 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637881680 |
Product | deoxycytidine triphosphate deaminase |
Protein accession | YP_483424 |
Protein GI | 161353752 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0717] Deoxycytidine deaminase |
TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.756279 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGTTGT CCGACCGGGA CATCCGGACC GAGATCGCCA CGGGCCGGAT CCGTCTCGAC CCCCACGACC CTGGCCTCAT CCAGCCGTCC AGCATCGATC TACGGCTGGA CCGCTGGTTC CGGGTCTTCG CCAACCACCG GTACAGCCAC ATTGATCCCT CTCTTGAGCA GGAGGATCTC ACCGAGCTCA TCGCCCCGGA GGGCGACGAG CCGTTCGTCC TGCATCCGGG CGAGTTCGTC CTCGGCTCGA CGCTGGAGAT CGTCACCCTG CCCGACGATC TCGCCGGCCG GCTGGAAGGG AAGTCGAGTC TCGGCCGGCT CGGGCTGCTC ACGCACTCGA CGGCGGGCTT CATCGACCCC GGCTTCTCCG GGCACGTCAC GCTGGAACTG TCGAACGTGG CGACGCTGCC GATCAAACTC TGGCCCGGCA TGAAGATCGG CCAGCTCTGC CTGTTCCGGC TGTCCTCGCC GGCCGAGCAC TCGTACGGCT CGACCATCTA CGGTTCGCGC TACCAGGGTC AGCGCGGCCC GACCCCGTCG AGGGCCTACC GGGACTTCAC CCGCGCACCG GTCCCGAACG GGGAGATCCC CCCAGGCTGA
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Protein sequence | MLLSDRDIRT EIATGRIRLD PHDPGLIQPS SIDLRLDRWF RVFANHRYSH IDPSLEQEDL TELIAPEGDE PFVLHPGEFV LGSTLEIVTL PDDLAGRLEG KSSLGRLGLL THSTAGFIDP GFSGHVTLEL SNVATLPIKL WPGMKIGQLC LFRLSSPAEH SYGSTIYGSR YQGQRGPTPS RAYRDFTRAP VPNGEIPPG
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