| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4347 |
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| Symbol | |
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| ID | 3907319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5188732 |
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| End bp | 5191146 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881678 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_483422 |
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| Protein GI | 86743022 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.138652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA AAGCGTCCTA TCTGATCGAG TCGTGGTCCA TCCAGGAGTC CGGTCTCGAC
ATCTCCGATC TGGGCCGCTC CGAGTCATTG TTCGCCCTGT CCAACGGCCA TATCGGGCTC
CGGGGAAACC TCGACGAGGG CGATCCGCAC GGCCTGCCGG GCACCTACCT GAACTCGGTC
CACGAGCTGC GGCCCCTGCC CTATGCCGAG GCCGGCTACG GATATCCAGA GTCCGGCCAG
ACGGTCATCA ACGTCACCAA CGGCAAGGTG ATCCGTCTAC TTGTCGACGA CGAGCCGTTT
GACATCCGCT ATGGCGATCT GCGGTCGCAT CAGCGGGCGA TCGACTTCCG GGAGGGCGTG
CTCCGGCGGG ACGTGGAATG GGTCTCGCCG GCGGGGCAGA CTATCCGGGT GCACTCCGAG
CGGCTGGTGT CGTTCTCGCA GCGTTCCATC GCGGCCGTGT ACTACGAGAT CGAGCCGGTG
GGCGACCCGG CGCGGGTCGT CATCCAGTCG GAGCTGGTGG CCAACGAGCA GCTGCCGGCC
TGGCACGGTG ACCCGCGGGC CGCGTCCGCG CTGGAGTCGC CGCTGCGATC CGAGCGCCAT
CGGGCGAGCG GCACGATGGT TGAGCTCGTC CACATCACCC ACCGCAGCGA GATCCGTGTC
GCCGCGGCCA TGGACCACGA GTTTGCCGGG CCGGACTCGC TGGGTGTCTC CTCGGAGAGC
GAGCCGGACG CCGGCCGGGT GACGGCCACG GCGGTACTCG CCCCGGGCGA GAAGCTGCGG
ATGGTCAAGT TCATCGCCTA CGGCTGGTCG GAGCAACGGT CCCTGCCGGC CCTCAGAGAC
CAAGCGGCCG CGGCGCTGGT CGCAGCGCGG CAGACCGGGT GGCCCGGTCT CGTCGCCGAG
CAGCGGCAGT ACCTGGATGC CTTCTGGAAG CGGGCCGACG TCGAGGTCGA CGGCGATCCG
GAGGTGCAGC AGGCCGTTCG CTTCGCGCTG TTCCACGTCC TGCAGGCCGG ATCGCGGGCC
GAGCGGCGGG CGATCCCGGC CAAGGGCCTG ACCGGCCCCG GCTACGACGG GCACGCCTTC
TGGGACTCCG AGTCGTACGT GCTCCCCGTC CTGACGTACA CCGCGCCCGA CGCGGCCGCC
GACGCGCTGC GCTGGCGGTA CGCGACTCTG CCGCTGGCCA GGGAACGAGC CGATCTGCTC
AATCTGAAGG GCGCCGTCTT CCCCTGGCGC ACCATCCACG GAGAGGAGTG CTCCGGATAC
TGGCCAGCCG GGACGGCCGC CTTCCACGTC AACGCCGACA TCGCCGACGC GGTCGCCCGC
TACGTCACCA TCACCGGGGA CGAGCGGTTC GAGCGCACGG TGGGGCTGGA GATCCTGATC
GAGACCGCCC GGCTGTGGCG GTCGCTGGGA CATCACGACC TCGACGGCCG CTTCCGGATC
GACGGTGTCA CGGGCCCGGA CGAGTACTCG GCCATCGCCG ACAACAACGT CTACACGAAC
CTGATGGCGC AGCGGAACCT CGTGGCCGCG GCGGACGCCG CCCGCCGCCA TCCCGACCGG
GCCGCCGAGC TGGGCGTGGA CGCCGAGGTC ACGGCGTCCT GGCGGGACGC GGCCGAGAAC
ATGTTCATCC CCTACGACCC CCATCTCGGC GTCCATCCGC AGTCCGAGGG ATTCACCGAA
CACCAGGTCT GGGACTTCGC GAACACCGCG CCCGAGCAGT ACCCTCTGCT GCTGCACTTC
CCGTACTTCG ACCTCTACCG CAAGCAGGTC ATCAAGCAGG CGGACCTGGT CCTGGCGATG
CAGCGCCGGG GTGACGCCTT CACGATGGAC GAGAAGATCC GCAACTTCGC CTACTACGAA
GCTCTGACGG TTCGGGACTC GTCACTGTCG GCATGCTCCC AGGCGGTGCT GGCCGCTGAG
TGTGGGCACC TGTCGCTCGC CCATGACTAC CTGCGCGAAG CCGCCCTGAT GGATCTGCAT
GACATCGAGC ACAACACCGG AGATGGGCTG CACATGGCCT CCCTCGCGGG AAGCTGGATC
GCCCTCGTCG AGGGCTTCGG TGGGCTGCGT GACGGCGGTG AGGTGATCTC GTTCGCGCCG
CGGTTGCCCG AGGGACTGAC CAGGCTGGCC TTCGGGCTCT GTGTCCGCGG GCGGCACCTG
CGGGTGGAGG TCTCCGACTC GACGGCCGTC TACACCGTCC CCGCGGGGCC GGCGATGACG
TTGCTGCACC ACGGCAAGAC CGTCCGGGTG GTTCCCGGCC AGCCGGTCAG CATGGAGGTC
CCGCCGACGC CCGTCCTGGA ACGGCCGAAG CAGCCCTCGG GCCGGGAGCC GCTGCGCTTC
CTGCGCCTGC CCGGGACCGG CGGCCGTATC GGTCCTACCG GCCCTAGCGG TTCCGTCAAC
AGCATCGACG GCTGA
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| Protein sequence | MIDKASYLIE SWSIQESGLD ISDLGRSESL FALSNGHIGL RGNLDEGDPH GLPGTYLNSV
HELRPLPYAE AGYGYPESGQ TVINVTNGKV IRLLVDDEPF DIRYGDLRSH QRAIDFREGV
LRRDVEWVSP AGQTIRVHSE RLVSFSQRSI AAVYYEIEPV GDPARVVIQS ELVANEQLPA
WHGDPRAASA LESPLRSERH RASGTMVELV HITHRSEIRV AAAMDHEFAG PDSLGVSSES
EPDAGRVTAT AVLAPGEKLR MVKFIAYGWS EQRSLPALRD QAAAALVAAR QTGWPGLVAE
QRQYLDAFWK RADVEVDGDP EVQQAVRFAL FHVLQAGSRA ERRAIPAKGL TGPGYDGHAF
WDSESYVLPV LTYTAPDAAA DALRWRYATL PLARERADLL NLKGAVFPWR TIHGEECSGY
WPAGTAAFHV NADIADAVAR YVTITGDERF ERTVGLEILI ETARLWRSLG HHDLDGRFRI
DGVTGPDEYS AIADNNVYTN LMAQRNLVAA ADAARRHPDR AAELGVDAEV TASWRDAAEN
MFIPYDPHLG VHPQSEGFTE HQVWDFANTA PEQYPLLLHF PYFDLYRKQV IKQADLVLAM
QRRGDAFTMD EKIRNFAYYE ALTVRDSSLS ACSQAVLAAE CGHLSLAHDY LREAALMDLH
DIEHNTGDGL HMASLAGSWI ALVEGFGGLR DGGEVISFAP RLPEGLTRLA FGLCVRGRHL
RVEVSDSTAV YTVPAGPAMT LLHHGKTVRV VPGQPVSMEV PPTPVLERPK QPSGREPLRF
LRLPGTGGRI GPTGPSGSVN SIDG
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