Gene Francci3_4336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4336 
Symbol 
ID3907306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5178041 
End bp5178466 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID637881665 
ProductPilT protein-like 
Protein accessionYP_483411 
Protein GI86743011 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.586249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTTCC TACTCGACAC CAACGTCATC TCCGAGCTCC GTAAGCCCGC GAAACGCCGC 
GATGACCGCT TCAACGGCTG GGCCGCGAGC CTGTCACCAT CGGATACCTT CCTCTCCGTC
ATCACCCTGC TAGAGCTGCG GGCTGGCATT GAGAACAAGC GATGGCGCGA TGCCCGCCAG
GCGGCCGTCC TGGACTCATG GCTCGATCAG AACGTGCTCC CGGCATACGC AGGCCGGCTG
CTCGACGTCG ATCAGATCGT CGCCGGCTCG GCGGCGCGAC TTCACGTGCC CGACCGGCGC
CCAGCCCACG ATGCGCTCAT CGCCGCCACG GCCCAGGTGC ACAGCCTCAC GCTCGTCACC
CGCAACGAGG CCGACTTCGC CGCCATGGAC GTCCCACTCG TCAACCCTTG GACCTCCCAG
CTGTAA
 
Protein sequence
MSFLLDTNVI SELRKPAKRR DDRFNGWAAS LSPSDTFLSV ITLLELRAGI ENKRWRDARQ 
AAVLDSWLDQ NVLPAYAGRL LDVDQIVAGS AARLHVPDRR PAHDALIAAT AQVHSLTLVT
RNEADFAAMD VPLVNPWTSQ L