| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4318 |
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| Symbol | |
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| ID | 3907287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5158768 |
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| End bp | 5159562 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881646 |
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| Product | Cof protein |
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| Protein accession | YP_483393 |
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| Protein GI | 86742993 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.873657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGC TTCCGCCCGC GATCGTCGCC ACCGACCTGG ACGGGACGCT GATCCGCAGC
GACGGCACGG TGTCCGAACG CACCCGCGGG GCGTTGCGCC GGGTGGAACG CGCCGGGGCG
ACCGTGGTGT TCGTGACGGG ACGACCCAGT CGGGTGATGG CCGGCGTCGT CGCCCAGACC
GAGGTCTCCG GGCTCGCGAT CTGCGCGAAC GGCGCGCTGG TCTTCGATCT CGACTCCGGC
GAGCCGGTCA GCCAGCGCTG TCTGGAATCG GCCACGGCCC TGCGGCTGGC GGCGGCGATC
CGCGCCGCGG TTCCCGACGC GGTGTTCGCG GTCGAGAGCG GCGTGCGCTT CGGCCGGGAA
CCCGCCTTCG AGGCGATGTG GCCGGATCCC AAGGAGATCG TCGCGGAGTT CTCGGAGCTG
CTGGGCGTCC TGCCGGCGAC GAAACTGCTT GTCCGGCGGG GGGGCGCTCC GTTCACGGAA
GTGTACGACG CCATCGTCGA ACTCGCCGGG GTGGACGCCG TCGTCACAAC CTCCAGCGCG
GACCTTCTCG AGATCGCGGG GCCGGGGGTG TCGAAGGCGG TGGCACTGGC TGAACTCGCC
GCCGGGCGGG GGGTGGTCGC CGCCGACGTC ATCGCGTTCG GAGATATGCC GAACGATCTA
CCGATGTTCG CCTGGGCCGG ATACGCGGTC GCCGTCGCGA ATGCCCATCC CGAAGTACTG
GCCGCCGCCG ACGAGATCAC CGTGTCGAAT GATGAGGACG GGGTCGCGAT CGTCCTGGAG
CGGCTTTTCC CATAA
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| Protein sequence | MTVLPPAIVA TDLDGTLIRS DGTVSERTRG ALRRVERAGA TVVFVTGRPS RVMAGVVAQT
EVSGLAICAN GALVFDLDSG EPVSQRCLES ATALRLAAAI RAAVPDAVFA VESGVRFGRE
PAFEAMWPDP KEIVAEFSEL LGVLPATKLL VRRGGAPFTE VYDAIVELAG VDAVVTTSSA
DLLEIAGPGV SKAVALAELA AGRGVVAADV IAFGDMPNDL PMFAWAGYAV AVANAHPEVL
AAADEITVSN DEDGVAIVLE RLFP
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