| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4304 |
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| Symbol | hppA |
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| ID | 3907272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5136512 |
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| End bp | 5138851 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637881631 |
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| Product | membrane-bound proton-translocating pyrophosphatase |
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| Protein accession | YP_483379 |
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| Protein GI | 86742979 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3808] Inorganic pyrophosphatase |
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| TIGRFAM ID | [TIGR01104] vacuolar-type H(+)-translocating pyrophosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCGA TCCAAGCCCT ACAGGCCGAG GGCTCTGGAA TTGACCTTAG CGGCAGAGCC
CTCGGCCTGG TCGCCGGTGT GGCGATAGTC GCAGCCCTCG CATTGCTTGT TGCCGGTTAT
CTGGTTCGTG AGGTATTGGC GGCGAGTCCA GGCACCCCGA GGATGGTGGA GGTCGGCCGG
GCGGTCCAGG AGGGCGCCGC CGCCTATCTC AGACGGCAGT TCACCACACT CGCGGGATTC
GTCGTCGTCA TCCCCTTCGT ACTGCTGCTC CTGCCAGCCG AGAACACTGG AGCGAAGATC
GGTCGGTCGA TCTTCTTCGT GGTCGGTGCG ATCTTCTCCG CGTTGGTCGG ATTCGTCGGG
ATGTCGCTGG CGACCCGGGC CAACACCCGC ACTGCCGCCG CCGCCATGAC CCGAGGGGAA
CGAGCCGCCG TCCGCATCGC CTTCCGCACC GGGGGGGTGG TGGGGATGTT CACCGTCGGT
CTCGGACTCC TGGGGGCGGC GGCCGTGGTC CTCGTCTTCC GGGACACCGC CCCCCAGGTC
CTGGAGGGAT TCGGATTCGG CGCCGCTCTG CTCGCGATGT TCATGCGAGT AGGCGGAGGG
ATCTTCACCA AGGCCGCCGA TGTCGGGGCG GACCTGGTCG GCAAGGTGGA ACAGGGGATT
CCCGAGGATG ATCCCCGCAA CGCCGCGACG ATCGCCGACA ACGTCGGCGA CAACGTCGGC
GACTGCGCCG GCATGGCCGC CGACCTGTTC GAATCCTATG CGGTGACGCT CGTCGCGGCG
CTGATTCTCG GGGTCGAGGC GTTCGGCGAA CGCGGCCTGG TGTTCCCCCT GCTCATCCCG
GCGGTCGGGG TTGTGACCGC GGTCATCGGA ATCTTCGCGG TGTCGCCGCG GGCCGGTGAC
CGCACCGGAA TGTCCGCCAT CAACCGGGGT TTCTTCATCT CCGCGGTGGT GTCCGCGATC
GGCGTCGTCG CCGTCTCACT GCTCTACCTC CCGACGAGCT TCGCCGATTT CCCCGGGATG
CAGGGAAGCA CCCAGTCCGG TAATCCACGA GTGATCGCGA TCGGCGCGGT CCTGATCGGG
ATCGTGCTCG CCGCCGCCAT TCAGCTGCTA ACCGGGTATT TCACCGAGAC CGGCCGCCGG
CCGGTGCGGG ACATCGCAAA GGCGTCGCTC ACCGGACCAG CCACCAACAT CCTCGCCGGA
ATCGGGGTGG GTCTGGAGTC GGCGGTCTAT TCTTCGCTGC TCATCGGTGC CGCGATCTTT
GGCGCCTACC TGCTCGGCTC CGGCAGCGTC ACGATCGCGC TGTTCGCGGT GGCGCTGGCG
GGGACCGGTC TGCTGACGAC GGTGGGTGTC ATCGTCTCGA TGGACACCTT CGGGCCGGTG
AGCGATAACG CACAGGGCAT CGCCGAGATG TCCGGCGACA TGGACGAGGC GGGTGCGGCC
ATCCTCACCT CGCTCGACGC CGTCGGCAAC ACCACCAAGG CGATCACGAA GGGCATCGCG
ATCGCCACCG CGGTGCTCGC CGCCTCGGCG CTGTTCGGCT CGTTCACCGA CACCGTCACG
ACGGCTCTCC GCGACGCCGG AGCGCTGCCC GAGGCGGGTC GGGGCATCGT TGGCGGCCTG
AACATCGCCT ACCCCGACGC GCTGGTCGGG CTCACCATAG GTGCGTCCGT GGTCTTCCTG
TTCTCCGGGC TCGCGATCAA TGCGGTGGGC CGCGCGGCCG GGCGGGTCGT CCTGGAGGTA
CGCAACCAGT TCCGGTCCAG GCCTGGAATC ATGACCGGCG ACGAGAAGCC GGATTACAGT
GCGGTCGTCG ACATCTGCAC CCGCGATTCG CTCCGCGAAC TGATTACACC GGGAACGCTG
GCGGTTCTCG CCCCAATCGC GGTCGGTTTC GGCCTGGGAT ACCCGCCACT CGGTGCGTTC
CTCGGCGGCG CCATCGCCGG CGGCGTGCTG ATGGCCGTGT TCCTCGCGAA CTCCGGCGGG
GCCTGGGATA ACGCGAAGAA GATGGTCGAG GACGGCCACC ACGGCGGAAA AGGCTCGGAG
GTCCACGCGG CCACGGTGAT CGGCGATACC GTGGGAGATC CATTCAAGGA CACCGCCGGC
CCTTCGATCA ACCCGCTGCT CAAGGTGATG AATCTGGTCA GCCTGCTGAT CGCTCCGACG
GTCGTAAAGT ACTCGGTGGG CGCGGACGAG AACACGGGGC TGCGCATCGG TGTCGCCCTC
GCCGCCCTCG CCGCCATCGC AGCCGTGATC ATCATCTCCA GACGACGGAG CTCAATGATC
AACGATGTGC CCGATATGAC ACAACCGACA CCGGCTCCCA GCGAGAAGAT CAACGCCTGA
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| Protein sequence | MSSIQALQAE GSGIDLSGRA LGLVAGVAIV AALALLVAGY LVREVLAASP GTPRMVEVGR
AVQEGAAAYL RRQFTTLAGF VVVIPFVLLL LPAENTGAKI GRSIFFVVGA IFSALVGFVG
MSLATRANTR TAAAAMTRGE RAAVRIAFRT GGVVGMFTVG LGLLGAAAVV LVFRDTAPQV
LEGFGFGAAL LAMFMRVGGG IFTKAADVGA DLVGKVEQGI PEDDPRNAAT IADNVGDNVG
DCAGMAADLF ESYAVTLVAA LILGVEAFGE RGLVFPLLIP AVGVVTAVIG IFAVSPRAGD
RTGMSAINRG FFISAVVSAI GVVAVSLLYL PTSFADFPGM QGSTQSGNPR VIAIGAVLIG
IVLAAAIQLL TGYFTETGRR PVRDIAKASL TGPATNILAG IGVGLESAVY SSLLIGAAIF
GAYLLGSGSV TIALFAVALA GTGLLTTVGV IVSMDTFGPV SDNAQGIAEM SGDMDEAGAA
ILTSLDAVGN TTKAITKGIA IATAVLAASA LFGSFTDTVT TALRDAGALP EAGRGIVGGL
NIAYPDALVG LTIGASVVFL FSGLAINAVG RAAGRVVLEV RNQFRSRPGI MTGDEKPDYS
AVVDICTRDS LRELITPGTL AVLAPIAVGF GLGYPPLGAF LGGAIAGGVL MAVFLANSGG
AWDNAKKMVE DGHHGGKGSE VHAATVIGDT VGDPFKDTAG PSINPLLKVM NLVSLLIAPT
VVKYSVGADE NTGLRIGVAL AALAAIAAVI IISRRRSSMI NDVPDMTQPT PAPSEKINA
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