Gene Francci3_4271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4271 
Symbol 
ID3907238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5095902 
End bp5096318 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content68% 
IMG OID637881597 
Producthypothetical protein 
Protein accessionYP_483346 
Protein GI86742946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000446812 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGC CGATGAGGAT TCCCGTGAGC TTCGGGGATG TGTTCCCGCA CGGGGCGTTT 
GTGCTGGGCG TGGAGGCTGA CCGTGACTTC GATGCGGTGA AGGCGGGTCT GTCCGATCCA
CAGGTGCGGG ACAAGGAGAC AGGACTGAAG GTGTGGCTGG TGCGGGTGCT GGACGCGGCG
CCGGATCTGC GGGCCGGTCA GGCTGAGGTG AAGGTGAAGC TTGCGGCTGA GGTGCAGCCG
GTCCCACCGG ACACGCTCGC GGGTACGCCG TTTCGTCCGG TGGAGTTCGA CGGGCTGACG
GTCACCGCGT ATGTAGACCA GTCGCGGAAG ACGCCCCGGG TGGGTTACAG CCTGCGTGCT
CGGGGGATGC GCGCCCCGAT GGTGGCGAGC GCGCGGTCCG GGAAGGCGGC GGCGTAG
 
Protein sequence
MAVPMRIPVS FGDVFPHGAF VLGVEADRDF DAVKAGLSDP QVRDKETGLK VWLVRVLDAA 
PDLRAGQAEV KVKLAAEVQP VPPDTLAGTP FRPVEFDGLT VTAYVDQSRK TPRVGYSLRA
RGMRAPMVAS ARSGKAAA