| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4270 |
|---|
| Symbol | |
|---|
| ID | 3907237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 5094958 |
|---|
| End bp | 5095722 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637881596 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_483345 |
|---|
| Protein GI | 86742945 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000212772 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCCA TCGACAGAAC CAGCGACCGA CCCGCCTATC AGCAGATCGC GGACGAGCTT
CGCTACGACA TCGACGCAGG ACGCCTAGCG GAAGGTGCCA AACTCCCATC TGAACGCGAC
CTGGCCGAGC GATACGACAC GTCCCGAGTC ACGGTGCGCC AGGCGATCGC CGTTCTCCGG
TCGGAAGGAC TAGTTGCTCC GGAGCACGGC AAGGGCATCT ACGTGAAGCG CCGCCGACGC
ATCGAACGAA CTGCCCCAAG CCGTCTATCC CGCGCAGCCC GCGACGCCAA CCGGAGCGCT
TTCACCGGTG ACACGCTGAA CACCGGATAC ACCCCCCACG TCGAAGTCGA GATCGCGATC
GAGACCGCAG GGCAGCCAGC AGGCGACCTC TTCCATATCG CACCCGAAGA CGACGTCCTG
ACTCGTGACC GCACGATGTA CGCCGACGGC GAGCCCGTAC AGCTTGCGAT CTCCATCTAC
AACTACGCGC TGGTCAAGGG CACCGCTATC GAGCAGAAGG ACACCGGTCC CGGCGGAGTC
CACGCCCGCC TTGCCGATCT TGGACGCGGA CCGGTCAGGT TCACCGAGAC CCTCACGGCC
AGCATGCCCA ACCCCGAAGT GGCCCGCCTA CTCCGCCTAG GCGAGGGCAG CCCCGTCATC
AGGATCGAGC GACTCGCCTA CGACCATGCG GACCACGTAG TCGAGATCAC CCACATGACC
CTTGCCGCTG ACCGCTACGT GCTCCGCTAC GACTTCGACG GGTAG
|
|---|
| Protein sequence | MAPIDRTSDR PAYQQIADEL RYDIDAGRLA EGAKLPSERD LAERYDTSRV TVRQAIAVLR
SEGLVAPEHG KGIYVKRRRR IERTAPSRLS RAARDANRSA FTGDTLNTGY TPHVEVEIAI
ETAGQPAGDL FHIAPEDDVL TRDRTMYADG EPVQLAISIY NYALVKGTAI EQKDTGPGGV
HARLADLGRG PVRFTETLTA SMPNPEVARL LRLGEGSPVI RIERLAYDHA DHVVEITHMT
LAADRYVLRY DFDG
|
|---|
| |