Gene Francci3_4263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4263 
Symbol 
ID3907230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5085068 
End bp5086132 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content67% 
IMG OID637881589 
Productphosphate ABC transporter permease 
Protein accessionYP_483338 
Protein GI86742938 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG CGACCGTTCC CGGCAGCGCC GTCGCGGGCG GTGAGGACCG GCTGCAGCTG 
CGGGGCCGGG TCCTGCCCCG CTGGGTACCG CTCGCCGCCG CTGCCGGTGC CGTCGTCCTG
ACGGTCCTGA TCTATCTGGT GACCTCGATC TCCAGCAGGA TCCAGTTCCT CCTGCTGGTC
GCCGTCTTCT TCATCCTCGC GATGACCGTG CCCTCGACGC TGGTCGAGGG CGCCCGCCGG
GCCCGGGACC GGTTCGCGAC GAACCTGGTC TACGCCGCCT TCCTGCTAGC GGTCATCCCC
CTGCTCGCGG TGCTCGTGAA TGTGATCGAG AAGGGTGCGA GGCGGCTGCG CCCCGGATTC
TTCACTCACT CGATGAACGG CATCGGTGCC CGTGACGTCG GCGGTGGCAT CTACCACGCG
ATCATCGGCA CAGTGGAGCA GGTCGCGTTG GCGAGCCTGC TGGCCGTGCC GTTCGGTCTG
CTGGTGGCCA TCTACCTGGT GGAATATGGC CGCGGCCGGG TCAGCCGGGT GATCAGTTTC
TTTGTCGACG TGCTCACCGG TCTTCCCTCG ATCATCGCGG GTCTGTTCAT CCTGGCGTTC
TGGATCCTCG CCCTTCACCA GGGCTTCTCC GGATTCGCGG GTGCCCTGGC CCTCACGGTG
CTCATGATTC CGATCGTGGT GCGCTCCGCC GAGGAAATGC TGAAGCTCGT TCCGGACGAG
CTGCGGGAGG CCAGCTACGC CCTCGGGGTG GCGCGTTGGC GGACCATCCT CAAGGTGGTC
GTCCCCACCG CGTTGCCCGG GATCGTGACC GGCGTCATGC TCGCGGTCGC CCGCGTTGCC
GGCGAGATCG CGCCGCTGCT GCTGACCGTC TTCGGCACGA ACCTCATCAA CGCCAACCCG
TTCTCCGGGG AGCAGTCCGC ACTGCCGCTG TACATCTACT CGCAGGCCGG CCAGCCGCAG
CAGGCGGCGG TGGACCGGGC CTGGGCCGCC GCCCTGGTAC TCATCGTCAT CATCATGCTG
CTCAACTTCA TCGCTCGTCT GATCGCCGGA CGCTCGCGGC TGTGA
 
Protein sequence
MKTATVPGSA VAGGEDRLQL RGRVLPRWVP LAAAAGAVVL TVLIYLVTSI SSRIQFLLLV 
AVFFILAMTV PSTLVEGARR ARDRFATNLV YAAFLLAVIP LLAVLVNVIE KGARRLRPGF
FTHSMNGIGA RDVGGGIYHA IIGTVEQVAL ASLLAVPFGL LVAIYLVEYG RGRVSRVISF
FVDVLTGLPS IIAGLFILAF WILALHQGFS GFAGALALTV LMIPIVVRSA EEMLKLVPDE
LREASYALGV ARWRTILKVV VPTALPGIVT GVMLAVARVA GEIAPLLLTV FGTNLINANP
FSGEQSALPL YIYSQAGQPQ QAAVDRAWAA ALVLIVIIML LNFIARLIAG RSRL