Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4231 |
Symbol | |
ID | 3907197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5047526 |
End bp | 5049781 |
Gene Length | 2256 bp |
Protein Length | 751 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637881557 |
Product | Terpene synthase, metal-binding |
Protein accession | YP_483306 |
Protein GI | 86742906 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCTT TCACGCTACC GGAGTTCTAC GTGCCCTATC CGGCACGGCT CAATCCGAAC CTGGAACAGG CCCGCGTGCA CAGCAGGGCT TGGGCCGACG AGATGGAGAT GATCGACTCT CCGCAGCACG GAACCGCGAT CTGGACCGAG GCCGACTTCG ACGCACACGA CTACGCCCTG CTCTGTGCAT ACACCCATCC GGACTCCGTC AGCCGAAAAC TCGATCTGGT CACCGACTGG TATGTCTGGG TTTTCTACTT CGACGACCAC TTCCTGGAGC TGTACAAGCG GTCCCACGAC ATGGCCGGCG CCCGGGCCTA CCTCGACCGC CTGCCCGCCT TCATGCCCGT CGACGGTGAG ATCACCGAGA CGCCGACCAA CCCGGTGGAA CGCGGACTCG CCGACCTGTG GACCCGGACC GTCCCGGAGC GTTCCGCCGA CTGGCGGCGG CGGTTCGCGG TCAGCACCAA GAACCTGCTG GACGAGTCCC TGTGGGAACT AGCCAACATC AACGCCGGCA GGCTCGCCAA CCCGATCGAA TACGTCGAGA TGCGGCGCAA GGTCGGCGGC GCGCCCTGGT CGGCGAACCT CGTCGAGCAC GCCGCCGACG CCGAGGTGCC GGCCCAGGTC GCGGCGACCC GGCCGCTGCA GGTACTGCGG GACACCTTCG CCGACGCCGT GCATCTGCGC AACGACCTGT TCTCCTACCA GCGCGAGGTC GAAGAGGAGG GCGAGCTCAG CAACGGCGTG CTCGTCATCG AACGTTTCCT CGGCTGTGGA ACCCAGGAGG CCGCCGACAC GGTCAACGAC CTGCTCACCT CGCGGCTGCA CCAGTTCGAG CACACCGCGG TCACCGAACT GCCGGCGGTC CTCGAGGAGC ACGGTGTCGA CCCGGGGAGC CGGCTGGAGG TCCTGGCGTA CGTGAAGGGT CTGCAGGACT GGCAGTCAGG GGGCCACGAA TGGCACCTGC GCTCGAGCCG GTACATGAAC CGGGCCGTGG CGCCTGAGAG CGGCGAGCTC AGCGGACTCC TCGGACTCAC CGGTCTCGGT ACCTCGGCGG CCCGGATTGT GCCGTCCCTC GTCACCACCA CACCGCGCCG GATCCGCTCC TTCACGCACA TCCCGCACCA GATCGTCGGG CCGCTGCGCC ATCCCGACTT CTGCATGCCC TTCTCGACCG GGCAGAGCCC ACATCTGGAC GCCTCCCGCC GGGAAAACAT CATCTGGGCC CGGGCGGTAG GGATGCTGGA CCCGATTCCG GGCATCTGGG ACGAACACAA ACTGCGGGCG TTCGACTTCG CGCTGTGCTC GGCCGGAATC CATCCGGACG CGACCCTGCC GGAACTGAAT CTGACGACGG ACTGGCTCAC CTGGGGGACC TACGCCGACG ACTACTACCC GGTAATCTTC GGCCGCACCC GGGACATCCT CGGGGCCAAG GTGTGCAACG CCCGGCTGTC GGAGTTCATG CCGCTGGACT CCCCCGTCAC CGCGGTGCCG GCCAACGCGT TGGAACGCGG TCTGGCCGAC CTGTGGACGC GCACCACCGA GACCATGGCG CCAGGCGCGC GCGAGACGTT CCGCGGCACC GTCGAGGTTA TGATCGACAG CTGGCTGTGG GAGCTGGCAA ACCAGGCCCA GAATCGCATT CCCGACCCGA TCGACTACAT TGAGATGCGC CGGGCGACCT TCGGTTCGGA TCTGACGATG AGCCTGGCCC GGCTGGCCCG GCTGGCCCAG GAACAGACCG TGCCACCCGA GATCTACCGC ACCCGGCCGA TCCAGGCCTT GGAGAACGCG GCCGCGGACT ACGCCTGTCT CCTCAACGAC GTCTTCTCCT ATCAGAAGGA GATCCAGTTC GAGGGTGAGA TCCACAACTG TGTCCTCGTC GTCGAGAACT TCCTCGACTG CGACCGGGAG CGTGCCCTCG CGGTGGTCAA CGATCTGATG ACCTCCCGGA TACGCCAGTT CGAGCACATC GTGGCGCACG AGCTTCCGGC GCTGTTCGAC AGCTTCGCCC TGGACGCGTC GGCGCGGCAG GCGCTGCTGG GCTACGCGCG GGAACTCCAG AACTGGCTGG CCGGGATCCT CCGCTGGCAT GAGGGCACGC ATCGGTACGA GGAGTCCGAA CTGCGGTACC ACCCAGCGGC GGGAGTACGG CCCTTCGGCG GCCCCACGGG CCTGGGCACC TCGTCCGCCC ACGTCCGCCC ACGTCCGGCC GCGGCGGCCG GCGCGGCCGG CGATAGTGAA ATGTAG
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Protein sequence | MQPFTLPEFY VPYPARLNPN LEQARVHSRA WADEMEMIDS PQHGTAIWTE ADFDAHDYAL LCAYTHPDSV SRKLDLVTDW YVWVFYFDDH FLELYKRSHD MAGARAYLDR LPAFMPVDGE ITETPTNPVE RGLADLWTRT VPERSADWRR RFAVSTKNLL DESLWELANI NAGRLANPIE YVEMRRKVGG APWSANLVEH AADAEVPAQV AATRPLQVLR DTFADAVHLR NDLFSYQREV EEEGELSNGV LVIERFLGCG TQEAADTVND LLTSRLHQFE HTAVTELPAV LEEHGVDPGS RLEVLAYVKG LQDWQSGGHE WHLRSSRYMN RAVAPESGEL SGLLGLTGLG TSAARIVPSL VTTTPRRIRS FTHIPHQIVG PLRHPDFCMP FSTGQSPHLD ASRRENIIWA RAVGMLDPIP GIWDEHKLRA FDFALCSAGI HPDATLPELN LTTDWLTWGT YADDYYPVIF GRTRDILGAK VCNARLSEFM PLDSPVTAVP ANALERGLAD LWTRTTETMA PGARETFRGT VEVMIDSWLW ELANQAQNRI PDPIDYIEMR RATFGSDLTM SLARLARLAQ EQTVPPEIYR TRPIQALENA AADYACLLND VFSYQKEIQF EGEIHNCVLV VENFLDCDRE RALAVVNDLM TSRIRQFEHI VAHELPALFD SFALDASARQ ALLGYARELQ NWLAGILRWH EGTHRYEESE LRYHPAAGVR PFGGPTGLGT SSAHVRPRPA AAAGAAGDSE M
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