Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4211 |
Symbol | |
ID | 3907176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5027998 |
End bp | 5028930 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637881538 |
Product | transposase, IS4 |
Protein accession | YP_483287 |
Protein GI | 86742887 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACATC GTGTCGACTC GTACCCAGCG GATCACGGAC ATTCGGGATC AAGCCTCAGC AGAGACCACG CTCCGTCACC ACCGAATCTG CGACAGAGCC GACCATTGGA CAGGCTCCTG CGCGGCGCCG CCGGCCCGGA CGGGAAGACC CCGCACCTGC TCGCAGCGGT CACCCACGCC ACCGGCGCGG TGCTCGCCGA GCACCAGATC GGCGCGAAGA CCAACGAGGT TCCCGCGTTC GTCCCGCTGC TGCGCGAGCT GCACACCTAC CACCCGCCGA CCGGCCACGT GATCACCGCT GATGCCGCCC ACACCAACCG CGCCCACGCC GAGGCGATCG TCACCGAGCT CGGCGCGCAC TTCGTGTTCA CCGTCAAGAA CAACACCCCC GCCCTGGCCG TCGACTGCCA CCAGGTGACC GACTGGACGA AGGCCCCGAT CGGCCACACC ACCGAGGGAA AGGCCCACGG CCGGCTCGAG AAGCGCACCA TCCAGCTCGC CGAGGCCAGC GAGGCGATCC GCGCCCGCCA CCCGCACGCC CGCACCGTCG CCCGGATCCG CCGCCGGACC ACCCGCACCG TCACCCGCGG CACCCCCCGG CGCCGCGTCA CCCGCAGGAC CACCACCACA ACCACCGTCC ACGTCATCAC CAGCCTCGCC CCCGGCGAGG TCACCGCCGC CGAACTCGCC ACCTACGTCC GGGACCACTG GACTGTGGAG AACCGCGTCC ACCGGGTCCG CGATGTGACG TTCCGTGAGG ACGCCTCCCG CGTCCGGACC GGCCCCCCGC CCCGCGTACT GGCCACGTTC CGTAACCTTG CCATCGGCCT GCTCCGCCAG GCCGGACACC CCCGGATCAG CCCCACCCCG CGCCGCCTCC GCCACGACCC AGCCCTGCTC ACAGCCATCC TCGGCCTCGA AAACCCGGCC TGA
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Protein sequence | MTHRVDSYPA DHGHSGSSLS RDHAPSPPNL RQSRPLDRLL RGAAGPDGKT PHLLAAVTHA TGAVLAEHQI GAKTNEVPAF VPLLRELHTY HPPTGHVITA DAAHTNRAHA EAIVTELGAH FVFTVKNNTP ALAVDCHQVT DWTKAPIGHT TEGKAHGRLE KRTIQLAEAS EAIRARHPHA RTVARIRRRT TRTVTRGTPR RRVTRRTTTT TTVHVITSLA PGEVTAAELA TYVRDHWTVE NRVHRVRDVT FREDASRVRT GPPPRVLATF RNLAIGLLRQ AGHPRISPTP RRLRHDPALL TAILGLENPA
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