Gene Francci3_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4193 
Symbol 
ID3907158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5004249 
End bp5004617 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content65% 
IMG OID637881521 
Producttransposase 
Protein accessionYP_483270 
Protein GI86742870 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGT GGATCCTCAC CCACCCCGAG CACCTCAACG AGGACGAGAC TCTGGCGTCG 
AAGACGATTC TCACGCGCTG CCCGGACCTC CAGAAGACCG CCGACCGCGT CACGGCGTTC
GCGCAGATGC TCACCGGTCG TCACGGGGAC CGGCTCAATG GTTGGGTCGA CGCCGACGAC
CTGTCCGAAC TGCACCGTTT CACCCGCGGT CTCCTGCGTG ACCACGACGC CGTCCTCAAC
GGGCTTACCC TGCCGCACAG TTCCGGTCAG GTCGAAGGAG CCGTGAACCG CATCAAAATG
ATCAAGAGGC AGATGTACGG CCGCGCGAGC TTCGACCTCC TCCGCAAACG AGTCCTCCTC
GCGACCTGA
 
Protein sequence
MTRWILTHPE HLNEDETLAS KTILTRCPDL QKTADRVTAF AQMLTGRHGD RLNGWVDADD 
LSELHRFTRG LLRDHDAVLN GLTLPHSSGQ VEGAVNRIKM IKRQMYGRAS FDLLRKRVLL
AT