Gene Francci3_4192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4192 
Symbol 
ID3907157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5003634 
End bp5004230 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content73% 
IMG OID637881520 
ProductIS6 family transposase 
Protein accessionYP_483269 
Protein GI86742869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTGCC GGGACCGGGC CGGTGCCTAC GCCGATGGCG CCCGTACCAG CGCTCCGGAC 
GCGGTGCAGG TGGCGGACCG CTTCCACCTG TGGAGCAACC TCGCCGGATA TGTCGAGACG
ACGGTGGCCC GGCACCGTTC CTGCCTGGCG GAACCGCCGT CCACCGAGCA GGCTGTGGAC
GGCCCGCGGG CGGACCTCGA CGGCGCGGTG GCCGCGGCGC GGGACGCGCA GTTCGAGCAG
CGGGCGTTCG TGCGACATGC CCGTGAGCGG TACGCCGCCG TCCAGGAGCT CAAGGCCGCG
GGCGTGGGCA TCAAACCGAT CGCCGCCCGA CTCGGTCTGG CCCGAGGAAC GGTCCGTAAG
TACTACCGCG CGACCAGCGT TGACGACGTT CTGGCGAAGG CCCGCGACGA GCGCGGCTCG
ATTCTGCGGC CGTGGGAGCC TTACCTCACC GGGCGGGTCA ACGCCGGGAT CACCAACGGC
AGCCAGCTGT TCGGGGAGAT CCGAGCCCAG GGCTACCCCG GGAGCAGAGC CGTCGTTCTG
GCCTACCTGC GCCCACTACG CGCCGGCGGT GGCACCGCCG CACCCGCGGC ACGGTAG
 
Protein sequence
MICRDRAGAY ADGARTSAPD AVQVADRFHL WSNLAGYVET TVARHRSCLA EPPSTEQAVD 
GPRADLDGAV AAARDAQFEQ RAFVRHARER YAAVQELKAA GVGIKPIAAR LGLARGTVRK
YYRATSVDDV LAKARDERGS ILRPWEPYLT GRVNAGITNG SQLFGEIRAQ GYPGSRAVVL
AYLRPLRAGG GTAAPAAR