Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4191 |
Symbol | |
ID | 3907156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5002948 |
End bp | 5003637 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637881519 |
Product | transposase, IS204/IS1001/IS1096/IS1165 |
Protein accession | YP_483268 |
Protein GI | 86742868 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGGAAG AATCGGGGTT ACCACCACCA ACCGATGACG TCCTGACGAG AGGCACCCAC CGGGTGAAGA GACTACGCAG ATCTGACCTT GGGGTTGTCC TTCCGCACCT GGCGGGTCTC GTTGTCGATC GGGTGGACCG GTCTGGTGAT CGGCTGCGGT TACGGGCTCG TGTTCGAGGA GCTGCTGCTG CGTGCCCCGG GTGCGGAGTG CTCTCGGAGC GGGTCCACGG GCGGTATCGC CGCCGGTTGG TCGACGCGGC GATCGCGGGT GCTCACGTCG AGATCGACCT GCTGATCCGG CGGTTCCGCT GCCTGGCGGT GAGCTGTCCA CGGGTGACGT TCGCGGAGCA GGTCGTGGGC CTGACACATC CGCATGCCCG GTTCACCCCG CTCGCCGACC GGTTGATCGA AGCGATCGGG TTGGCGTTGG CGGGCAGAGC CGGAGCACGC CTGGCCGGCA GGATGGGGCT TCCGGCTGGT CGGAACACGC TGCTGCGCCG GGTCCGGGCA CTGCCCGACC CGCAGGTCGG GGCGGTGACG GTCCTCGGGG TGGACGACTT CGCGTTGCGC CGGGGTCGGG TTTACGGGAC GGTCCTGGTC GATCTCGACA GCCGCTGGCC GGTGGACCTG CTGCCTGACC GGGAAGCGGC GACGTTCGCC GGCTGGCTGG GCATCCCGGT GCGCGGGTGA
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Protein sequence | MQEESGLPPP TDDVLTRGTH RVKRLRRSDL GVVLPHLAGL VVDRVDRSGD RLRLRARVRG AAAACPGCGV LSERVHGRYR RRLVDAAIAG AHVEIDLLIR RFRCLAVSCP RVTFAEQVVG LTHPHARFTP LADRLIEAIG LALAGRAGAR LAGRMGLPAG RNTLLRRVRA LPDPQVGAVT VLGVDDFALR RGRVYGTVLV DLDSRWPVDL LPDREAATFA GWLGIPVRG
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