Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4145 |
Symbol | |
ID | 3907110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4945748 |
End bp | 4947202 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881473 |
Product | transposase IS66 |
Protein accession | YP_483222 |
Protein GI | 86742822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCTGC TTGCGGACCG GGACGCCACC ATCGCCGCCC AGGCGGCCAC GATCGCGGAG CAGGCGCGGC TGGTCGAGCG GCTGGTCGGG CAGGTGGAGC AGCTCACCGA CAGGGTCCGC GAACTGGACC GCCAACTCGG CAGGGACAGT ACGAACTCGT CGTGGCCGTC GTCGTCGGAC AGCCCGTATA CGAAGAAGAA GGCCAAGCCC CGGTCGTCGC GGACGTCGAT GGGCCGGCCG AGGGGTAAGC AGCCCGGCGC GACGGGCGCG ACCCGTCAGA TGGTCGACGA CCCGGACGAG ATCCACACGA TCGACCCGTC GTTATGCGCG GACTGCGGGT TCCCGCTGGC CGGAGCGGCG AGGCTCACGA CGCGGCGCCA CCAGATCTTC GACCCGCCGC CCCCGCCGCG CCCGTATGTC ATCGAGTACC GGATCGTGAC GCGGGTCTGT CCGTGCTGCG CGGCGACGAC CGAGGGGCTG ACACCCGTCC CGCTGGCGGG CCGGCTTGTC TGGGGCCCGC GGATGCTCGC GCGAGCGGTG TGGCTCGTGT GCGCGCACCA CCTCCCGATC CGCCGCGCCG CGGCGGTCCT GACGGTGATG GTCGGCGCGA CGGTCTCCGC CGGCTGGGCC GGCGGCGTGC GAGCCCGCGC CGCGCGTCTG TTGGAGAACA CCTTCCTCCC GCACGTGCGG GCGTTGATCG CCGCCGCGCC GGTCGCGCAC GCCGACGAGA CGACCGCCCG CGCCGACGGC GCGCTGCGCT ACGTCCACGT CGCCGCCACC GACTACCTGA CCGCGCTGCA CACCGGTGAC CGGACCGCCG AGACGATCGA CGCCGGCGGG ATCTGGCCGG CGTTCACCGG CGTGCTGATG CGGGACGGCT ACCAGGGCTA CACCCACCTC ACCCGGGCGC TGCACGCCTG GTGCGGCGCG CACACCCTGC GCGACCTGCG GTCCATCCAT GACGGCGACC GTGGCGGGCA GGTCTGGGCC GACGCGATGG CGACCACCCT GCTCGACGCC CACCACGCCG CGTGCGACGC CCGCGACGCC GGGGCGAACG CGCTCGCGCC CGAGGCCGTC GCCCTCATCC GCAACCACTA CCGCGGCGCG CTCGCCCGCG GCGAGACCGA CAACCACGGG GACCGCTCGT CACTCGCCCA CGACGCTCGC ACACTGATCC GCCGGATGCG CCGCGAGGAG GACATGATCC TCCGCTTCGT CGTCGACCTG ACCGTGCCCT TCTCGAACAA TCAAGCAGAA AGGGACGTCA GGCCGGTCAA GGTCCAGCAA CGCACCTCCG GTGGTTGCTG GCGGACCCTG GCCGGCCTCG TCGACTTCGC GGTCGTGCAG TCCTACCTGT CGACCGCGAC CAAGTGGGGC CTCGACACCC TCGACGTTCT CGAACGACTC TTCACGACCG GCCCCTGGCT ACCGCCCGCC GCTGAACCCG GCTGA
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Protein sequence | MRLLADRDAT IAAQAATIAE QARLVERLVG QVEQLTDRVR ELDRQLGRDS TNSSWPSSSD SPYTKKKAKP RSSRTSMGRP RGKQPGATGA TRQMVDDPDE IHTIDPSLCA DCGFPLAGAA RLTTRRHQIF DPPPPPRPYV IEYRIVTRVC PCCAATTEGL TPVPLAGRLV WGPRMLARAV WLVCAHHLPI RRAAAVLTVM VGATVSAGWA GGVRARAARL LENTFLPHVR ALIAAAPVAH ADETTARADG ALRYVHVAAT DYLTALHTGD RTAETIDAGG IWPAFTGVLM RDGYQGYTHL TRALHAWCGA HTLRDLRSIH DGDRGGQVWA DAMATTLLDA HHAACDARDA GANALAPEAV ALIRNHYRGA LARGETDNHG DRSSLAHDAR TLIRRMRREE DMILRFVVDL TVPFSNNQAE RDVRPVKVQQ RTSGGCWRTL AGLVDFAVVQ SYLSTATKWG LDTLDVLERL FTTGPWLPPA AEPG
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