| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4110 |
|---|
| Symbol | |
|---|
| ID | 3907074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4915559 |
|---|
| End bp | 4916269 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637881438 |
|---|
| Product | integrase |
|---|
| Protein accession | YP_483187 |
|---|
| Protein GI | 86742787 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3316] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAC GTCGTGCCTG TCCACCGGTT CCGGTGTCGG AGTTCGCGGG GTTCCGGTTC
CCACCTGAGG TGATTGTCCT CGCTGTCCGC TGGTACCTGC GGTACGTACT GTCCTACCGG
GACGTCGAGG AGCTGCTCGC TGAACGCGGC CTCGAGGTCG ACCACGTCAC GGTCTATCGG
TGGGTGCAGC GCTTCACGCC CTTGCTGGTG GAGGCGGCCC GGCCGTGCCG GCACCGTCCT
GGCGGAAGGT GGTTCGTCGA CGAGACCTAC GTCAAGGTCT CCGGCCGCTG GACCTACGTG
TACCGGGCGG TCGACCAATA CGGGCAGGTC ATCGACGTCC TCGCCAGCAC ACGGCGCGAC
CAGGCAACCG CCCGGCGATT CTTCGTTCGA GCGCTGACGT ATGGGCGCCG CCCGGACGAG
GTCACCACCG ACAAGGCCGC GGTCTACCCG CGGGTCCTCG ACGAGCTGGT ACCCGAGGCC
TGCCACATCG ACGCCGCCCG GGAGAACAAC CGGATCGAAG CCGACCACGG CCGGTTGACA
GCACGGCTCC GACCGATGCG CGGACTGAAA CGACTGCGGT CCGTCCAGAC GATCAGCGCC
GGCCACGCGC TGGTCCAGAA CATCCGCCGC GGCCACTACG AACTCGGGAT CGACACCAGG
CCGCAGATAC GGCTGGCAGC CGCGTTCACC GAACTCGCCG CCGCTGTCTG A
|
|---|
| Protein sequence | MRRRRACPPV PVSEFAGFRF PPEVIVLAVR WYLRYVLSYR DVEELLAERG LEVDHVTVYR
WVQRFTPLLV EAARPCRHRP GGRWFVDETY VKVSGRWTYV YRAVDQYGQV IDVLASTRRD
QATARRFFVR ALTYGRRPDE VTTDKAAVYP RVLDELVPEA CHIDAARENN RIEADHGRLT
ARLRPMRGLK RLRSVQTISA GHALVQNIRR GHYELGIDTR PQIRLAAAFT ELAAAV
|
|---|
| |