Gene Francci3_4106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4106 
Symbol 
ID3907070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4913339 
End bp4914028 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID637881434 
ProductDSBA oxidoreductase 
Protein accessionYP_483183 
Protein GI86742783 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATCG AGGTCTTCTA CGACGTGCTG TGCCCCTGGT GCTACATCGG TAAGCACCGG 
CTGCGGCGGG TCCTGACGGA TTTTCCCGGC CGCGACGAGG TTCGACTGCG GTGGCGCAGC
TATCAGTTGT CACCGGACGA GGGGCGCATC CCTGGCCCGA CCGCCGCCGA GGCGATGGCC
ACATGGACCG CACCGGACCA GCTGCCCGTG CGGCTGGCCC TGATCGAGCA GCTCGGCACG
GACCTGGGCT TGGCTATCGA CCTCGACAAA GCGCGTCCCG TCAACACTTT CGACGCGCAT
CGGCTGACCC ATTTCGCGGC CGACCATGAG CGGGCCGATG CGCTCGTCGA GGCGCTGCTG
CGGGCCTACC AGGCGGAGGG GCGGAACGTC GCCGACCACC TCGTCCTGCT GGAGTTGGCG
CACGAGGTGG GCCTGCCCGA GGAGGAGACG GGCGCGGTGC TCGCCGGTGA CCGCTACGCC
GACGCCGTCA TCGCCGATCA GCGCCGCGCC GCCGAGTTGC GGGTGAGCGG CGTGCCGACG
CTCGTCGTCG ACGGCGGCCG GCCGTTCTCG GGCATGCAGC CGCCGGAGAT GGTCCGCGCC
GAGTTGGACC GTGCCGCAGC GGCCTCCAGG GCACTGTTGC ATCGGCGGAG TCCGTTGTCC
CACGGCCGCC GTCCGGTCAT GATCGAGTGA
 
Protein sequence
MLIEVFYDVL CPWCYIGKHR LRRVLTDFPG RDEVRLRWRS YQLSPDEGRI PGPTAAEAMA 
TWTAPDQLPV RLALIEQLGT DLGLAIDLDK ARPVNTFDAH RLTHFAADHE RADALVEALL
RAYQAEGRNV ADHLVLLELA HEVGLPEEET GAVLAGDRYA DAVIADQRRA AELRVSGVPT
LVVDGGRPFS GMQPPEMVRA ELDRAAAASR ALLHRRSPLS HGRRPVMIE