Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4081 |
Symbol | |
ID | 3907045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4887450 |
End bp | 4888124 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637881409 |
Product | putative transposase |
Protein accession | YP_483158 |
Protein GI | 86742758 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGAC GTCGTGCCTG TCCACCGGTC CCGACATCGG AGTTCGCGGG GTTCCGGTTC CCACCCGAGG TGATCGTCCT CGCTGTCCGC TGGTACCTGC GGTACGCCCT GTCGTACCGG GACGTCGAGG AGCCGCTCGC CGACCGCGGC CTTGAGGTCG ACCACGTCAC GGTCTACCGG TGGGTGCGGC GCTTCACGCC CTTGCTGGTC GACGCGGCCC GGCCATACCG GCACACACCG GGTGATCGTT GGTTCGTTGA CGAAACGTAT GTGAAGGTCG CTGGACGATG GACCTATCTG TACCGGGCCG TCGACCAGTC CGGCCAGGTC ATCGACGTGC TGGCCTCCGA GAAGCGGGAC CTCGCCGCAG CCCGCCGGTT CTTCACCCGC GCCCTGTCCC ACGGCCGGCG GCCCGTCGAG GTGACCACCG ACCGGGCAGC CTTCTACCCA CGAGTCCTCG ACGAACAGCT CCCCGCCGCT CATCACGTCG ACGACCAGTA CGCGAACAAT CCGCTCGAGG CCGACCACGG CCGGTTCACG GCACGACTAC GGCCGATGCG CGGCCTGAAA CGCCTCCGCT ACGTACAGAT CATCGGCTCC GGGCACGCGT TCGTGCAGAA CATCCGCCGC GGCCACTACG AACTGGGCGT CGATGCCGAC CCCGGAACCG GCTGA
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Protein sequence | MRRRRACPPV PTSEFAGFRF PPEVIVLAVR WYLRYALSYR DVEEPLADRG LEVDHVTVYR WVRRFTPLLV DAARPYRHTP GDRWFVDETY VKVAGRWTYL YRAVDQSGQV IDVLASEKRD LAAARRFFTR ALSHGRRPVE VTTDRAAFYP RVLDEQLPAA HHVDDQYANN PLEADHGRFT ARLRPMRGLK RLRYVQIIGS GHAFVQNIRR GHYELGVDAD PGTG
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