| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4054 |
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| Symbol | |
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| ID | 3907015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4845643 |
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| End bp | 4847265 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881383 |
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| Product | aminotransferase |
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| Protein accession | YP_483133 |
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| Protein GI | 86742733 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTTT CCGCTCGTGA CGCCGCCGGC GGCTCAGCCG GCCGCACGGC GCCCCCCGCG
ACCGTGCCTT CCGTAACCAC GAGAGCCACG ACGACGCCCC CTGCGACCAC GACCCCCCCG
ACCACGACCC CCCCGACCAC GACCCCCGTC GCCGCCAGGT CCACGCCTGC AGCCCCCACC
ACGGGTCCCA GGTCCGCACC CACGGACGCC GCGAACCCGG CCACGATCCT CGCGCGTCAG
CGTCAGCGCG AATCGGCGGC ACGGACCTAT GCGCGGACCC TCCCGATCGT GCCTGTCCGG
GCGTCCGGAA CCATGGTTCT CGGCGCGGAT GGCCGCCGCT ACCTGGACTG CCTGGCCGGC
GCCGGAACGC TCGCGCTGGG ACACAACCAT CCGGTGGTAA CCGAGGCGAT CACATCGATG
CTTGCCCGAG GCGCCCCGTT GCACACGCTC GACCTCGCCA CCCCCGAGAA GGACGCCTTC
ACCGACGAAC TCCGTGGCTG CCTGCCGGCC GGCATGGGGA GCGATGTGAA GTTGCACTTC
TGCGGCCCGA GCGGCGCCGA CGCGGTCGAG GCGGCCATCA AGCTCGCGCA GACGGTGACG
GGCAACCAGA CCATCCTCGC GTTCACCGGT GGATACCACG GAATGACGGC GGGTGCCCTG
GCCGTGACCG GGAACGTCGC CGTCAAAGAT CCTCTGCCGC CATCGACATC CGTCGTACGG
CTGCCGTTCC CCTTCCCCTA CCGGTGCCCG TTCGGGGTGG GGTCCGGTCG CGCCCCCGGT
CCGGACGGTG CCGAGTTGTC CGCCCGCTAC ATCGAACGTC TCCTCGATGA CCCGGCCGGA
GGGGTAGTCA GGCCGGCGGC ACTGATCGTA GAACCGGTTC AGGGTGAGGG CGGGGTGGTT
CCCGCTCCTG ACGGCTGGCT CCGCGCCATC CGCGAGATCA CCCGTCGCCG CGGCATCCCA
CTGATCCTGG ACGAGGTCCA GACGGGAGTC GGTCGCACCG GGAAGTACTG GGCCGCGCAG
CACAGCGGCA TCACCCCCGA CATCATCGTC ATGTCCAAGG CGATCGGCGG CGGGCTGCCA
CTGGCCGTCA TCGCCTACCG GTCTGAGCTG GACACCTGGG CGCCCGGGGC ACATACCGGC
ACCTTCCGTG GAAACCAGCT GGCGATGGCC GCGGGCCATG CCACGCTGCG CCTGGTGCGA
GAGGACCGTC TCGACGAACG CGCCGCCCGA CTCGGCACGC GCCTACTCAC CGGCCTGGCA
GAGATCGCCC GGAACCGGCC GCAGGTGGGC GACGTACGCG GCCGCGGGCT GATGCTCGGC
GCCGAGATGG TCGATCCGAC CGCAGCCCCG GACCTCGTCG GCGCGCATCC CGCCGACGCG
AGACTCGCCG GTCTGGTACG TGCCGAATGT CTGCGCCGCG GCCTGATCAT CGAGCTCGGT
GGGCGGCACG GCGCGGTCGT CCGGCTGTTG CCACCGCTGA TCCTCAGCGA TGAGGAGGGC
GATCGCGTCC TCGCGATCCT CGCCGACGCC ATCGATGCCG CCGTCCGCAG GCTCTCCGTC
CACGCGGCTT TGGGACACCC ACCCGCCGAT CAGGCCCACG TCCGGTTCGG ATCCGCCGGA
TGA
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| Protein sequence | MTVSARDAAG GSAGRTAPPA TVPSVTTRAT TTPPATTTPP TTTPPTTTPV AARSTPAAPT
TGPRSAPTDA ANPATILARQ RQRESAARTY ARTLPIVPVR ASGTMVLGAD GRRYLDCLAG
AGTLALGHNH PVVTEAITSM LARGAPLHTL DLATPEKDAF TDELRGCLPA GMGSDVKLHF
CGPSGADAVE AAIKLAQTVT GNQTILAFTG GYHGMTAGAL AVTGNVAVKD PLPPSTSVVR
LPFPFPYRCP FGVGSGRAPG PDGAELSARY IERLLDDPAG GVVRPAALIV EPVQGEGGVV
PAPDGWLRAI REITRRRGIP LILDEVQTGV GRTGKYWAAQ HSGITPDIIV MSKAIGGGLP
LAVIAYRSEL DTWAPGAHTG TFRGNQLAMA AGHATLRLVR EDRLDERAAR LGTRLLTGLA
EIARNRPQVG DVRGRGLMLG AEMVDPTAAP DLVGAHPADA RLAGLVRAEC LRRGLIIELG
GRHGAVVRLL PPLILSDEEG DRVLAILADA IDAAVRRLSV HAALGHPPAD QAHVRFGSAG
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