| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4053 |
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| Symbol | |
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| ID | 3907014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4843540 |
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| End bp | 4844994 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881382 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_483132 |
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| Protein GI | 86742732 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCTGC CGCCCTCGGC CGCGCCGCTG CGCGCCCTGC CCGCCGAAAG CCTCCCCCGT
CCGGTGTTGA CCGCGGTGCG TGCCTGGCCG GCCGGCGCCG GAGAGGTCAG CGCCTACTTT
TACGACCCGG CGGCGGCCGC GCGGAACGCC GCGGCGCTGC GGGCCTGCCT GCCCATGTGG
GCGGAGGTCT GCTACGCGGT CAAGGCCAAC AGCTTTCCGC CGATACTCGA CGCCCTGTTG
CGTGGGACCG GTCCGGACAT CCCTCGGTCG GGGCGGGAAC GGAGTGACTC CAGCCCGGGC
GCCAGCCCGA CCGACGCCAG GAGCGACGCC AGGAGCGACG CCAGGAGCGA CGCCAGGAGC
GACGCCAGGA CCGGCGCCAG CGGTCGGGGC ATCGACGGTT TCGAGGTCTC CTCCGCGCAC
GAGGTGCGCC TGGCGCAGGC AGCGTACGGC CGGGTCGACT CCGCCCGACG TCCCCGCCTG
GTCGCATCCG GACCGGGAAA GTCGATGACC CTGCTTACCG CGCTGGTCTC GGCCGACGTC
GACGTCGTCA ACGTCGAGAG CTTCGGCGAA CTGCGCCGCC TGGACGCCGT CGCGGCCCGG
CTCGGCCGTC GGGTGCGGGC GGCGGTGCGC GTCAACCCGG CCCAGGTAGG CCTGGCAGGC
TCCCTCCAAA TGGGCGGTCG GCCGAGTGCG TTTGGCATCC CCGAAACGGA GGTCCCCGCC
GCGCTCGAAC TCGCGGCGGA TCTGGCCCAT ATCGACGTCG TCGGATTCCA TGTCCACGCA
GTGTCCGGCA ATCTCGATGC CGCCGCCCAT CTGGGCTACG TCCGGTGGTG TCTCGATTTC
GCCGTCCGGA CGGCTGCCGT GGCCGGGATC GAGCTGCGGA TGGTCGACGT GGGCGGTGGA
TTCGGGGTTC CGTTCGAACC GGACCGGCGC GGTGACCGGC CCTTTGACCT AATCCGATTT
GGTGAGGGAC TAAGTTCGCT GCCGGTGCCG GACGGAACTC GGGTAATCTT CGAGCCGGGG
CGGATGCTGG TGGCCGACTC CGGCTGGTAC GCCGCCGAGG TGATCGACGT CAAACATTCC
TACGGGACGG AATTCGTGAT TCTGCGTGGC GGAATTCATC ATTTCGCGCT GCCGACATCG
TGGGAGATCG TCCATAACTT CGCCGTCGTG GAGAGATCGG GCCGGAACGG TGGGCCGGAG
CCGGAGCACA CGCGGGAGGC GGTGGTCGAA GGTCGTCCGG TGACGGTGGT CGGGGAGCTG
TGCACGCCGG AGGACACCCT CGCCCGTGAC ATCACGGTCG ATCGGGTGCG GCCGGGTGAC
GTCGTCGTCT TCCCCATGGC GGGTGCGTAC GGCTACGAGT TCGCACTGCC GGATTTCCTC
GGCCACCCCC GGGCCCGGCG CATCGAGCTT CGGGGAACAC GGCATGCTCC GTTCCCCACC
GATCGGTCGA GCTGA
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| Protein sequence | MDLPPSAAPL RALPAESLPR PVLTAVRAWP AGAGEVSAYF YDPAAAARNA AALRACLPMW
AEVCYAVKAN SFPPILDALL RGTGPDIPRS GRERSDSSPG ASPTDARSDA RSDARSDARS
DARTGASGRG IDGFEVSSAH EVRLAQAAYG RVDSARRPRL VASGPGKSMT LLTALVSADV
DVVNVESFGE LRRLDAVAAR LGRRVRAAVR VNPAQVGLAG SLQMGGRPSA FGIPETEVPA
ALELAADLAH IDVVGFHVHA VSGNLDAAAH LGYVRWCLDF AVRTAAVAGI ELRMVDVGGG
FGVPFEPDRR GDRPFDLIRF GEGLSSLPVP DGTRVIFEPG RMLVADSGWY AAEVIDVKHS
YGTEFVILRG GIHHFALPTS WEIVHNFAVV ERSGRNGGPE PEHTREAVVE GRPVTVVGEL
CTPEDTLARD ITVDRVRPGD VVVFPMAGAY GYEFALPDFL GHPRARRIEL RGTRHAPFPT
DRSS
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