| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4009 |
|---|
| Symbol | |
|---|
| ID | 3906970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 4791919 |
|---|
| End bp | 4792689 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637881338 |
|---|
| Product | transposase, IS4 |
|---|
| Protein accession | YP_483088 |
|---|
| Protein GI | 86742688 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACCTCG CGACCGACCG GCGCTGCCGC CCACTGTCCA TCATCCTCAC CCCCGGACAG
GCCGCGGACA GCCCGCGTTT CCTCCCGGTC CTTAAGAAGA TCAAGGTGCG TGGACCGGTC
GGCCGCCCCA GGACCCGGCC GGACGCGGTC GCCGGCGACA AGGCGTACTC CTCCCGCGCC
AACCGCGCCC ACCTGCGCAC ACGGAAGATC CAGGCGGTGA TCCCGGAGAA GGCCGACCAG
ACGGCCAACC GTAAGAAGCG CGGCAGCGCC GGAGGCCGCC CGGTCAGCCA CGACGCCACG
CTCTACAAAG ACCGCAACAC CGTGGAACGC GGCATCAACA AGATCAAGGA ATGGCGGGGT
CTGGCCACCC GCTACGACAA GACACCCGTC GGAACAGACC CTAACTGTCG ACACCTCACT
TGCCCCTGCC AGGGCCGCCA CCGTTCCTCG ATCCCAGGTG GTCAGTCGCT GTTATCCGAG
CCAGAGGGTC GCGCCGAGGG CTGCGAGCCT GTTCTTGCGG GTCTCGTAGT CAGGCAGGGC
GCGTTCGACC AGTCGCCAGA AGATTGGTGT GTGGTTTCGT TCGTGAGCGT GGGCGAGTTC
GTGGACGAGG ACGTAGTCGA CGAGACTGAC CGGGAGCTGC ATGGTCGCCC AATGGATGTT
GATTCGCCCG GTGGTGCTGA GCGAGCCCCA TCGGTGGCCG AGGTCGCGCA CGTCGAGGCC
GGTGATGTCG ACACCCATGC GGCTGGCCCA GGGACGGATG CGGGGTGGTA G
|
|---|
| Protein sequence | MHLATDRRCR PLSIILTPGQ AADSPRFLPV LKKIKVRGPV GRPRTRPDAV AGDKAYSSRA
NRAHLRTRKI QAVIPEKADQ TANRKKRGSA GGRPVSHDAT LYKDRNTVER GINKIKEWRG
LATRYDKTPV GTDPNCRHLT CPCQGRHRSS IPGGQSLLSE PEGRAEGCEP VLAGLVVRQG
AFDQSPEDWC VVSFVSVGEF VDEDVVDETD RELHGRPMDV DSPGGAERAP SVAEVAHVEA
GDVDTHAAGP GTDAGW
|
|---|
| |