Gene Francci3_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3947 
Symbol 
ID3906906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4725549 
End bp4726460 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content67% 
IMG OID637881274 
Productglycosyltransferases-like 
Protein accessionYP_483026 
Protein GI86742626 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.721107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCG AGAAGTCCAA CCGGTCCAGG TGGCAGTACG AGCTGGTACT GGTCAGTTTT 
CACAGCCGTG GCCAGCTCGA GCAGCTCTTC GCGACCCTTC CGTTGGACAT GCCGGTTGTG
ATCATCGATA ACGCGGAGGG CGTCGACCGC GTTGACGAGC TGATCGCGGA CCGGCCCAAC
AGCCGTTACC TCGACTCCGG TGGCGGCAAG GGATTCGCGA AGGCCGCCAA CATGGGCATC
CGTTCGTCGC GCTACGAGTA CGTGGTGCTC GGCAACCCGG ACAGCCGGCC CACCGTGGAG
GTCATCGACA CGCTGGTCGA CGACCTCATC GCCGATCCCG AACTGGTGAC CAGCGCGGCC
ACCATGAAGG GGCACGACGA CAAGCCCGAG CTCGGTAACG GCGGCTGGGA GCCGACGCCT
CGCCGGGTGC TGCTGCACGT GCTGGGAGCG CACAAGGTGG CGCCGAGCTC GGCGCTGTTC
GCCCGGCCGA CACCGGGCCG CCCGATGAAC CCCGAGTGGC TGACCGGCGC CTGCATGGCC
GTCCGTCGGT CCACCTTCCT CGAACTGGGC GCCTTTGATG AGACGTTCTA CGTCTACAAC
GAGGACATGG CGCTCGGCCG GGCGATCCGT GAGGCGGGGC TGCGGCAGAA GCTGCGCACC
GATCTGCTGG TACCCCACGG GGCGGGAGGT TCCGGGGCCG GTAAGACATG GATGCTGCAG
ATGCGCGGTG CGTCCATGGT GCGTTATCTG CGTAAGCACA ATGCGCCGGC TCGGGTGAAC
GTGATGCGCT CGATGCTCGT CGCCGGCTAC GCCGGGCGTA CGGTGCTCTC TCGGGCCCGG
GGCAGGAAGG CAGTGGCCGA CGAGCACGCC GCATATATCA AGGGCCTGCT GGTCGGACCG
CCGGCCCAGT AG
 
Protein sequence
MSVEKSNRSR WQYELVLVSF HSRGQLEQLF ATLPLDMPVV IIDNAEGVDR VDELIADRPN 
SRYLDSGGGK GFAKAANMGI RSSRYEYVVL GNPDSRPTVE VIDTLVDDLI ADPELVTSAA
TMKGHDDKPE LGNGGWEPTP RRVLLHVLGA HKVAPSSALF ARPTPGRPMN PEWLTGACMA
VRRSTFLELG AFDETFYVYN EDMALGRAIR EAGLRQKLRT DLLVPHGAGG SGAGKTWMLQ
MRGASMVRYL RKHNAPARVN VMRSMLVAGY AGRTVLSRAR GRKAVADEHA AYIKGLLVGP
PAQ