Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3945 |
Symbol | |
ID | 3906904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4722728 |
End bp | 4724071 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637881272 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_483024 |
Protein GI | 86742624 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.542591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCACC GCGCCATGCT CGGCCTGCTG GTCGGCCTCG CGCTGCTGGT CGGCCTCGTG ATGACGACCG CTCCGGCCGG CGCCGCCGTC CCGCCGTACG CGGCCGGGCC CGGCCCGGCT TCGATCGCGC CCGCCCGAGG CTCGCAGTGG TACCACGCTG TCCTGGGACT CGCCCAGGCG CACCGGATCA GCCAGGGCGC GGGCACGGTG GTGGCCGTCA TCGACGGCGG GGTCGACGCC AGCCAACCCA AGTTGTGGGG TCAGCTGCTT CCCGGTACCG GCATCGGCCC CGGGGCGGCG CGGGACGGTT GGCGCGACGA TGATCCGAAC GGCCACGGCA CCGCCATGGC GGGCATCATC GCCGGTCGCA ACGACAACGG CCGGCCCGAG GTCCGCGGCA TCGCCCCGGC CGCCAAGATC CTGCCCGTCT CGACCGGCGC CGAGGCGAAC TCGGAGGAGG TCGCGATCGG CATCCGCCGG GCAGTCGACC TGGGTGCCGA CGTCATCAAC CTCTCCCTGG GCTCGACGGG GACGGCGACC CCGGACGAGG AGAAAGCGGT CGGCTACGCC CTCGCGCACG ACGTGGTGGT GGTCGCCTCG GCGGGGAACG TCGAGTCCGG CGACACCGCG ATCAACTCCC CCGCCAGTAT CCCGGGGGTG GTCGCGGTGA CCGGATCGAC GGCCGCTGGT GGTTTCTGGC GGGAATCGGC CCACGGGCCG CGGGCCGTCA TCGCCGCGCC GGCCCCCGGT ATCCGGGCCC CCGTCCCGAC CCGGGTCTCC CCGGACGGCC TGGACACCGG GGGCGGCACC TCGAACTCCG CGGCGATCGT CGCGGGCGTT GTCGCCCTCA TCCGGGCCGC CCAGCCGGAC CTGGACGCAC CCAACGTCAT CGAGCGGCTC GTCTACACCG CGCGGGATGC GGGCTCTCCT GGCCGCGACG ACGAGTTCGG CTTTGGCATC GTCGACCCCG TCGCGGCGCT GACCCGGGCC GTGCCGGTGG TCAGGAGCAA TCCGCTGCTG TCGGCACCGA CACGCTGGGG GGTGGGGGGG CCCGCGCCGG CCGCCGGCCG CATCATGCCC GGCGGGCAGG CCCGGGGGTC CGCCGGCGAC GCGACGACCC ACGGGGCCGG CGCCACACTC ACGAACACCG GTCCGATCGG CGCAGCCGGC CCAGACTCAT CGAAACCCTC GCCACTGGTC TGGACCGCCG GGCTCGGGAT CGCGGCCTCG TTGGGCGTCC TGCTCGGGAT CGTGACACAT CTGCTGTACG CCTGGCAGCG CGCGACGCGG GCGGGACCGG GCCGCGCGGG CAGCCGCGTC CGCCCGCGCT CCCCTACCGG GTGA
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Protein sequence | MHHRAMLGLL VGLALLVGLV MTTAPAGAAV PPYAAGPGPA SIAPARGSQW YHAVLGLAQA HRISQGAGTV VAVIDGGVDA SQPKLWGQLL PGTGIGPGAA RDGWRDDDPN GHGTAMAGII AGRNDNGRPE VRGIAPAAKI LPVSTGAEAN SEEVAIGIRR AVDLGADVIN LSLGSTGTAT PDEEKAVGYA LAHDVVVVAS AGNVESGDTA INSPASIPGV VAVTGSTAAG GFWRESAHGP RAVIAAPAPG IRAPVPTRVS PDGLDTGGGT SNSAAIVAGV VALIRAAQPD LDAPNVIERL VYTARDAGSP GRDDEFGFGI VDPVAALTRA VPVVRSNPLL SAPTRWGVGG PAPAAGRIMP GGQARGSAGD ATTHGAGATL TNTGPIGAAG PDSSKPSPLV WTAGLGIAAS LGVLLGIVTH LLYAWQRATR AGPGRAGSRV RPRSPTG
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