Gene Francci3_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3925 
Symbol 
ID3906884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4694584 
End bp4695027 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content65% 
IMG OID637881252 
ProductMerR family transcriptional regulator 
Protein accessionYP_483004 
Protein GI86742604 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.847498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCACCA AGCGCCGTGG TGTTTCGGGA TCGAACACGA CCCGTGGCGA CGTTTACCAG 
ATCGGGGACG TTGCGGAGCG GGTCAGCCTC TCCCTGCGAA CAGTCCGCTA CTATGAGGAG
TCAGGGCTCC TCGCGCCGGT AGGTCGGACC GTAGGGGGAT TTCGTCTCTA CGACGACGAC
GCCATCGAGC GGCTGCTCCT CATCAAGAAG ATGAAACCGT TGGGGTTCAC CCTGGAGGAG
ATACGGTCGC TGCTGGCCCT TCGTGATGAG CTCGCCGAGC CCGACCTCGC CGCGGGCGTC
CGGGCCGAGC TCCAGGAGCG GCTTGGCACC TGGGTGGTAC TCGCGGAGGA AAAACTCTCC
ACGCTTCGGG AGCAGGTCAG CGTCGCGGAG TCGTTCGTCG GCGGGCTGCA CGACGACGCG
AAACGGTCGG GAGGAACCGT CTGA
 
Protein sequence
MSTKRRGVSG SNTTRGDVYQ IGDVAERVSL SLRTVRYYEE SGLLAPVGRT VGGFRLYDDD 
AIERLLLIKK MKPLGFTLEE IRSLLALRDE LAEPDLAAGV RAELQERLGT WVVLAEEKLS
TLREQVSVAE SFVGGLHDDA KRSGGTV