Gene Francci3_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3920 
Symbol 
ID3906879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4688267 
End bp4689328 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content74% 
IMG OID637881247 
ProductPpx/GppA phosphatase 
Protein accessionYP_482999 
Protein GI86742599 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.376929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGGG TCGCCGCGAT CGACTGTGGA ACCAACTCGA TCCGTCTGCT GGTGGCGGAC 
GTCGAGGGAT CGACCCTGCA CGAGCTGACC CGCCAGATGG AGATCGTCCG GCTGGGGGCC
GGGGTCGACC GGACCGGTGA GCTCGCGCCG GAGGCGCTCG CCCGCACCTT CACCGCGCTG
CGGGACTATG CCGAGCAGAT CGAGCGGCTG GGAGCCTCAC GGGTGCGGAT GGTCGCCACG
AGCGCGACCC GCGACGCGCG CAACCGCCAT GAGCTCGTCG CCGGGGTCCG CGCGATCCTC
GGTGTGGACC CCGAGGTGAT CAGCGGGAAC GAGGAGGCGG CCCTGTCCTT CGGCGGCGCC
ATCGGTGACC TCGTCGGCCG AGCCGGTTCG TTTGACGCCG GTTCGTTCGA CGCCAGTTCG
TCTGCCGGTT CGGTCGAGGG CGCGCCGACG GGGCCGGTCG CCACGCCGAT CCTGCTCGCC
GACATCGGCG GCGGCTCGAC CGAACTCGTC CTCGGGGACG TGAGCGGGGT GCGGGCCGCC
CGTTCGGTGA ACGTCGGATG CGTGCGGCTG GCGGAGCGGC ACCTGCACGA TGATCCGCCG
ACCGGCGCGC AGGCCGCGGC GATCGTCGCC GACGTGCACG CGGCACTCGA CCTCGCCGCC
CGTACCGTGC CCCTGACCGA GGCGGCGACG CTGGTCGGCG TCGCGGGGAC CGTCACCACG
GTCGCCGCCC TCGCGGCTGA TCTCCCCGAG TACGACCCGA CCCGCATCCA CCTGTCCGTG
ACGACGGCGG AGCAGGTCGC GCAGGTCACG GACCGGCTGC TGAGGATGAC GCACGACCAG
CGCGCGGCCC TGCCGGTGAT GCACCCGGGT CGGGTGGACG TCATCGCCGC CGGCGCGCTC
GTGCTGCGCA CCCTGGTCGA GCGAACGGGC GCCGCGGCGG TGGTGGCAAG CGAACGCGAC
ATCCTCGATG GGATAGCGCT GGCCCTGGCC GCCGCGCCGG GCGCCCCGGC CACCGGGCCC
GGGCGGGCGG CGCCGCCCGT CACCGCCGGC CCGTCGGTAT GA
 
Protein sequence
MSRVAAIDCG TNSIRLLVAD VEGSTLHELT RQMEIVRLGA GVDRTGELAP EALARTFTAL 
RDYAEQIERL GASRVRMVAT SATRDARNRH ELVAGVRAIL GVDPEVISGN EEAALSFGGA
IGDLVGRAGS FDAGSFDASS SAGSVEGAPT GPVATPILLA DIGGGSTELV LGDVSGVRAA
RSVNVGCVRL AERHLHDDPP TGAQAAAIVA DVHAALDLAA RTVPLTEAAT LVGVAGTVTT
VAALAADLPE YDPTRIHLSV TTAEQVAQVT DRLLRMTHDQ RAALPVMHPG RVDVIAAGAL
VLRTLVERTG AAAVVASERD ILDGIALALA AAPGAPATGP GRAAPPVTAG PSV