Gene Francci3_3911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3911 
Symbol 
ID3906679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4679840 
End bp4681534 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content69% 
IMG OID637881237 
Productmembrane bound O-acyl transferase, MBOAT 
Protein accessionYP_482990 
Protein GI86742590 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1696] Predicted membrane protein involved in D-alanine export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.164446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTTC CGACGATCGA GTTTGCGGCG TTCCTTGTCG TGGTGCTGGC GATCTCCTGG 
CTGCTGATGC CCCGGCCGAG GCTGTGGAAG CCGTTCATCC TCGGGGCGTC GTATTTCTTC
TACGGCTTCG CGGACGCACG CTTCGTGCTG CTGATCGTGG CCTCCACCTT GATCAACCAG
GGTGCCGCCG TCGCGATCCA CCGCTGGCGC GACCGCCGCG TCCTCATCGC CGCGATCGTC
TGCGACCTCG GCCTGCTCGG CTGGTTCAAG TACTACAGCT TCTTCGCCCT GTCGGTGGAC
CGCGCGCTGG CCGAGATCGG TCTCCCCACG GCGCTGCCCC TGCTCCAGGT GGCGCTGCCG
ATCGGGATCT CGTTCTTCAC CTTCCAGGCG CTGTCCTACG TCATCGACGT CCATCGCGGC
ACCAGCACAC CCGCGTCGCT GCTGGACTTC GCCGTGTACG AGGCGTTCTT CCCGCATCTG
GTCGCCGGTC CCATCGTGCG TGCGCGCGAG TTCATCCCCC AGCTCGCCAC GCCACGGGAC
CCGAACCAGG TCCAGGCCAC CCGGGCCGTG TTCCTGATCG TGGGCGGCCT GGTCAAGAAG
GTGGTGCTCG CCGATCTGAT CGCCTCACGC CTCGTCGACC CCGTCTTCGA CGCACCCGGC
CAGCACTCGT CGCTGGAGAT CGCCACGGCC GGCTACGGCT ACGCCGTGCA GATCTACTGT
GACTTCTCGG CGTACTCCGA CATCGCGATC GGGATCGCCC TCCTGCTCGG CTTCCGCTTC
CCGGACAACT TCGACCGTCC CTACGCGGCC GTCACCCTGC AGGACTTCTG GCGCCGCTGG
CACATGACCC TGTCCCGATG GCTACGGGAC TACGTCTACC TACCGCTCGG AGGGAACCGG
AAGGGGCAGC GGCGCACCTA CCTCAACATC ATGATCACCA TGACTCTGGG TGGTCTCTGG
CACGGCGCCG CCTGGACGTT CGTCCTGTGG GGAGCGCTGC ACGGCGGTGG GCTGGTGACC
GAACGCCGGA TCCGGGCCCG ACGGGCGGAC CGGATCCGGG CGACGGAACG GGCCCGAGCC
ACGGGACAGG AGCAGATCCC GGGACGGGCC CGAGCCACGG GACAGGAACA GATCCCGGGA
CAGGCCGAAT CGGCGGGGCT CTCCGCGATG CCGCTACCCC GGCCGGGATC GGAGAGCCCC
GCACCGCTCC TTTCCGCTGG CGGATCCGGC GCCGTTATTG GTCCCGGTCC CGCTGCCGGC
TTCGGCATCG CCGGCAGTTC CGCGGGGACG CCAACCACGG CGAGCCGCCG GACGATCATC
GCCGCACAGG CCGCGCTTCC CGAAGCGGTC CCCAACCCGG TCCGCGCCTG GGCCGGCCGG
CTGGCCGTCT TCCACTTCGT GTGTGCCACC TGGGTCCTGT TCCGAGCGCC CGACCTGGCA
ACGGCACGCG AGCTCGTCGT CCGGCTGTTC ACCGCGAGCG GACCGGCGCC GCTGGTCACT
CCGACGGTCC TCGCCGCCAT CGGGGTGGGA CTGGCCACCG CAGCCGTCCC GCGCGTCTGG
TGGATCCACG CGCAGGCCGC CTTCACCCGA CTGCGCCTTG GCGCCCAGAT CGCGCTGCTC
ACCCCGAGCA TCATGATCAT TTATGCGATC GTCGGCCCAC AGGACGTCGC GCCGTTCATC
TACTTCCGCT TCTGA
 
Protein sequence
MIFPTIEFAA FLVVVLAISW LLMPRPRLWK PFILGASYFF YGFADARFVL LIVASTLINQ 
GAAVAIHRWR DRRVLIAAIV CDLGLLGWFK YYSFFALSVD RALAEIGLPT ALPLLQVALP
IGISFFTFQA LSYVIDVHRG TSTPASLLDF AVYEAFFPHL VAGPIVRARE FIPQLATPRD
PNQVQATRAV FLIVGGLVKK VVLADLIASR LVDPVFDAPG QHSSLEIATA GYGYAVQIYC
DFSAYSDIAI GIALLLGFRF PDNFDRPYAA VTLQDFWRRW HMTLSRWLRD YVYLPLGGNR
KGQRRTYLNI MITMTLGGLW HGAAWTFVLW GALHGGGLVT ERRIRARRAD RIRATERARA
TGQEQIPGRA RATGQEQIPG QAESAGLSAM PLPRPGSESP APLLSAGGSG AVIGPGPAAG
FGIAGSSAGT PTTASRRTII AAQAALPEAV PNPVRAWAGR LAVFHFVCAT WVLFRAPDLA
TARELVVRLF TASGPAPLVT PTVLAAIGVG LATAAVPRVW WIHAQAAFTR LRLGAQIALL
TPSIMIIYAI VGPQDVAPFI YFRF