| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3881 |
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| Symbol | ispH |
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| ID | 3906649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4643460 |
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| End bp | 4644488 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637881207 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_482960 |
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| Protein GI | 86742560 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCAT CGGGTGATGC ATCGCCTAGC CGACTTCCCG GCCGCCCGCC GCCGCGTAGA
CTCCCACCCA TGGGCCGGGT CCTTCTTGCC AAACCGCGCG GCTACTGCGC TGGTGTCGAT
CGAGCCGTCG TGACCGTGGA GAAAGCACTA GAGCTGTACG GTTCACCGGT CTACGTACGC
AAACAAATCG TTCACAACCT TCATGTCGTG AAGACGCTGG AGGCCAAGGG CGCGATCTTC
GTGGACGAAA CCGACGAGGT GCCGCACGGC GCCACCGTCG TGTTTTCAGC CCACGGAGTG
GCACCAACGG TGCACGAAGA GGCGGCGGTG CGCGAGCTCC GCACAATCGA CGCCACGTGC
CCTCTGGTCA CCAAGGTGCA TTCTGAAGCC AGGCGGTTCG CCCGTGAGGA CTACGACATC
CTCCTCATCG GCCACGAGGG CCACGAGGAG GTCGTCGGCA CCACCGGGCA GGCTCCGGAC
CGCATCCACC TCGTGGACGG GCCCGAGGAC GCCGCCGGGG TGAAGGTCCG CGATCCGGAG
CGGGTGGCTT TCCTCTCCCA GACCACACTG TCCGTCGACG AGACGATGAC GACGGTTGAC
GCGCTGCGCG AGCGCTTCCC GCATCTGCAG GGTCCACCGA GCGACGACAT CTGCTACGCC
ACGCAGAACC GCCAGGTCGC CGTCAAGGAG ATCGCCGGCG CGGTCGACCT GGTCATCGTC
GTCGGCTCGC GGAACTCCTC GAACTCGGTC CGGTTGGTCG AGGTCGCGCT CGACGCCGGC
GCCCCGGCCG CCTACCTCGT GGACGACTCC ACCGAGGTGG ACCTGAGCTG GTTCGATGGT
GTCGAGACCG TCGGGGTCAC CAGTGGCGCA TCGGTGCCGG AGGAACTCGT CACCGGCGTG
ATGGCCTGGC TCGCCGAGCG GGGCTTCACC GATGTGGAGG AGGTCACGTC CGCGGACGAG
CACCTTCTCT TCGCGTTGCC GCCGGAGCTT CGCCGGGAGA TGCGTACCCG CGAGCGCGCC
GCCGGCTGA
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| Protein sequence | MSPSGDASPS RLPGRPPPRR LPPMGRVLLA KPRGYCAGVD RAVVTVEKAL ELYGSPVYVR
KQIVHNLHVV KTLEAKGAIF VDETDEVPHG ATVVFSAHGV APTVHEEAAV RELRTIDATC
PLVTKVHSEA RRFAREDYDI LLIGHEGHEE VVGTTGQAPD RIHLVDGPED AAGVKVRDPE
RVAFLSQTTL SVDETMTTVD ALRERFPHLQ GPPSDDICYA TQNRQVAVKE IAGAVDLVIV
VGSRNSSNSV RLVEVALDAG APAAYLVDDS TEVDLSWFDG VETVGVTSGA SVPEELVTGV
MAWLAERGFT DVEEVTSADE HLLFALPPEL RREMRTRERA AG
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