Gene Francci3_3835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3835 
Symbol 
ID3905583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4596531 
End bp4597277 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content73% 
IMG OID637881161 
Producthypothetical protein 
Protein accessionYP_482914 
Protein GI86742514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00378444 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCACCGG CCGCGCAGGA GTACCGGCGC TACGACGTCT ACGACGACTA CGGCGACTAC 
GACAGCCGGG CCAGGGACGC CTACGACAGC CGGGCCAGGG ACGACTACGA CAGCCGGGCC
AGGGACGCCT ACGACAGCCG CGCCGAGCCA CCGCCCGCCC CACGTGAGAG CCTGCTGCCC
TACATCACGT TCGTCCTCGT CGTGGCGGTC CTAGCCGGGA TCGCCGGTTA CACGCTGAAC
CGCCTGGTGG GACCGGCGCA CGGCGCGCGC TCCGCCCACC CGTCCGCACC GGGCGCCACC
CCCTCCCCGA CGGCCGTGCC CACCCCGTCG GCCGTGGGAG GCGGCCTCGC CGGCCTTACC
GCCGAGCAGG TGGCGATCCG GCTGGCCGGC GCGGGCCTGC CGCTGCACAC CACCGTCGTC
TACAGCGCGG CCACCGACCC GGATCGTCTC CTGGGCCGGA CGAACGGCTA CACCAGCAGA
ATCGCCTTCA GCGATCCGCG GGTGGGCGTC AACGAGGTCT CCGGAAGCCC CGCGGGCGCG
ATCGAGCGCG GCGGCGCGAT CGAGGTCTTC GCGGACGCGG CGAGCGCGCA GCAGCGGGCG
ACGAAGCTCC TCACCGTCAC CGCCGACAAC CCGCTCGTCA CCGAGTACGT CTTCGTCCAG
CGCACCGTGG TGCTCCGGGT CTCCCTGGTC CTCACCGCGG ACATCGCCCG GGAATACGAG
GCCGCGCTCC TGCGTCTCGC GGCCTGA
 
Protein sequence
MAPAAQEYRR YDVYDDYGDY DSRARDAYDS RARDDYDSRA RDAYDSRAEP PPAPRESLLP 
YITFVLVVAV LAGIAGYTLN RLVGPAHGAR SAHPSAPGAT PSPTAVPTPS AVGGGLAGLT
AEQVAIRLAG AGLPLHTTVV YSAATDPDRL LGRTNGYTSR IAFSDPRVGV NEVSGSPAGA
IERGGAIEVF ADAASAQQRA TKLLTVTADN PLVTEYVFVQ RTVVLRVSLV LTADIAREYE
AALLRLAA