Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3835 |
Symbol | |
ID | 3905583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4596531 |
End bp | 4597277 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881161 |
Product | hypothetical protein |
Protein accession | YP_482914 |
Protein GI | 86742514 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00378444 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCACCGG CCGCGCAGGA GTACCGGCGC TACGACGTCT ACGACGACTA CGGCGACTAC GACAGCCGGG CCAGGGACGC CTACGACAGC CGGGCCAGGG ACGACTACGA CAGCCGGGCC AGGGACGCCT ACGACAGCCG CGCCGAGCCA CCGCCCGCCC CACGTGAGAG CCTGCTGCCC TACATCACGT TCGTCCTCGT CGTGGCGGTC CTAGCCGGGA TCGCCGGTTA CACGCTGAAC CGCCTGGTGG GACCGGCGCA CGGCGCGCGC TCCGCCCACC CGTCCGCACC GGGCGCCACC CCCTCCCCGA CGGCCGTGCC CACCCCGTCG GCCGTGGGAG GCGGCCTCGC CGGCCTTACC GCCGAGCAGG TGGCGATCCG GCTGGCCGGC GCGGGCCTGC CGCTGCACAC CACCGTCGTC TACAGCGCGG CCACCGACCC GGATCGTCTC CTGGGCCGGA CGAACGGCTA CACCAGCAGA ATCGCCTTCA GCGATCCGCG GGTGGGCGTC AACGAGGTCT CCGGAAGCCC CGCGGGCGCG ATCGAGCGCG GCGGCGCGAT CGAGGTCTTC GCGGACGCGG CGAGCGCGCA GCAGCGGGCG ACGAAGCTCC TCACCGTCAC CGCCGACAAC CCGCTCGTCA CCGAGTACGT CTTCGTCCAG CGCACCGTGG TGCTCCGGGT CTCCCTGGTC CTCACCGCGG ACATCGCCCG GGAATACGAG GCCGCGCTCC TGCGTCTCGC GGCCTGA
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Protein sequence | MAPAAQEYRR YDVYDDYGDY DSRARDAYDS RARDDYDSRA RDAYDSRAEP PPAPRESLLP YITFVLVVAV LAGIAGYTLN RLVGPAHGAR SAHPSAPGAT PSPTAVPTPS AVGGGLAGLT AEQVAIRLAG AGLPLHTTVV YSAATDPDRL LGRTNGYTSR IAFSDPRVGV NEVSGSPAGA IERGGAIEVF ADAASAQQRA TKLLTVTADN PLVTEYVFVQ RTVVLRVSLV LTADIAREYE AALLRLAA
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