| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3830 |
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| Symbol | |
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| ID | 3905578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4591139 |
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| End bp | 4592686 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637881156 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_482909 |
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| Protein GI | 86742509 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.778945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0341938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTGCTC CGGGCGTGGG TGCTCCGGGG GCGGGTGCTC CGGGGGCGGG TGTTTCGAGG
ACGGGCGTTT CGGGTCCGGG GGCGCCGGGC GCCCGGGCGG GCTGCGACCC GGGCGCCGCC
GCGACCGACC GCGGGCGCGC TGCGGCGGAC GGGAACCCGC GGGAGCCGTC GGGAGGCTTG
CCGACGGTGA CCGCGGTGCG TGGCTTCGGC ACGCAGCCGC CGGCCCCACC GCCCGCCGAG
ACGGGCTCCC CGCGGGCGTG GTCGCCGACC TCGACGCCGT ATCCGCTGCC CGCGGACTCC
GACGGCGGCG GCTCCGAGAG CGGCGGCTCC GACAGCGGCG GCTCGAACGC CGCGCCGTTC
GCCGTGCCGT TCGCCGATGT CCTGACTGGT CGTTCGGCGC CGCGGGGGCG CCTGGTCGCT
CCTGGTCGCC CGATCGTTCT CGGTCACCGG GTCCTCCTCG CGAGCATCCT GGTCGCGGGT
CTGCTGGGTG GGGGGATCGG TGCGCTGCTC GTCTCGATGA CCGAGCGCGG CAGCGACCAA
CAGGCGTCGG CGGCCCTGCC GGTCGGTACC GCCGCGCCCA GCTCCGACCG CAGGTCGGTC
GCGTCGATCG CCGCGACGGC TCTGCCCAGT GTGGTGACGA TCGACGCCGG TGGCGGGGGG
GACGGCGATG CCGCGGGTAC CGGCTCCGGG GTGATCATTA GCCCGGAGGG GTACATCCTG
ACGAACAACC ACGTCGTGGC GTCCGCGGTC GCCGCCAGAA CTCCGATCTC CGTGCGCCGC
TACCAGGAGT TCGGCCAGGT CCGGGCCGAC CTGGTCGGGC GGGATCCCAA GACTGACATT
GCCGTTCTGC GGATCCCGGC CCCGCAGCCC CTGCCGGCGG TGACGCTCGG CCAGTCCGGC
TCGCTGGTCG TGGGAGCGCC GGTGGTTGCC ATCGGGGCGC CGTTCGGCCT CGCCGGCACC
GTGACGACCG GCGTCGTCAG CGCGCTCGAC CGCAATCCCA TGGTCCCGGC CGAGAGCGGC
ACCGACCCCA CGGTGCTCAT CGGGGCGATC CAGATCGACG CGGCGATCAA TCCGGGCAAC
TCCGGTGGTC CGCTGCTCGA CGGCCTCGGC CAGATGGTGG GGATCAATAC CGCGATCGCC
GCGGTGCCCG GCCATGAGTC CCAGAGCCAG AGCGGCAGCA TCGGCGTGGG GTTCGCCATC
CCGATCGACT TCGCCCGCTC GGTCGCTCAG GAGATCATTT CGACCGGTCG GGCGACCCAC
CCGTACCTCG GCGTGTCAGC CGCGACCGTC ACCGCCGGCC AGGCGAAGGC CATGGGGACC
ACGTCGGGTG CCCGCGTCGT CAACCTGGCG CCCGGTGGCC CCGCCGAGCG CGCCGGGCTG
CGCGTCGGCG ACATCATCAC GCGGGTGGAC ACCAGGGTTA TCAGCGGGAT GAACGACCTC
ATCGTCGCAG CCCGGCTCCA CCGGGTAGGT GACCGGGTGT CGGTCGCCTA CGAACGCGCC
GGTGCCACCG CGACCACCCA GCTGACGCTG CAGGAACAAC AGCGCTGA
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| Protein sequence | MGAPGVGAPG AGAPGAGVSR TGVSGPGAPG ARAGCDPGAA ATDRGRAAAD GNPREPSGGL
PTVTAVRGFG TQPPAPPPAE TGSPRAWSPT STPYPLPADS DGGGSESGGS DSGGSNAAPF
AVPFADVLTG RSAPRGRLVA PGRPIVLGHR VLLASILVAG LLGGGIGALL VSMTERGSDQ
QASAALPVGT AAPSSDRRSV ASIAATALPS VVTIDAGGGG DGDAAGTGSG VIISPEGYIL
TNNHVVASAV AARTPISVRR YQEFGQVRAD LVGRDPKTDI AVLRIPAPQP LPAVTLGQSG
SLVVGAPVVA IGAPFGLAGT VTTGVVSALD RNPMVPAESG TDPTVLIGAI QIDAAINPGN
SGGPLLDGLG QMVGINTAIA AVPGHESQSQ SGSIGVGFAI PIDFARSVAQ EIISTGRATH
PYLGVSAATV TAGQAKAMGT TSGARVVNLA PGGPAERAGL RVGDIITRVD TRVISGMNDL
IVAARLHRVG DRVSVAYERA GATATTQLTL QEQQR
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