| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3820 |
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| Symbol | |
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| ID | 3905568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4578408 |
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| End bp | 4580264 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637881146 |
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| Product | alkaline phosphatase |
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| Protein accession | YP_482899 |
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| Protein GI | 86742499 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00587129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.244243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGTG ACGCCGCGGC CGGCTCTCCG CGTTCCCGCC GATTCCCGCG GGCGCCCTCG
CCGTCAGCCG CCACCGGCTC GCCGTCAGCC GCCACCGGTC AGACTGGTCG ACCGGCCGGC
ACCGATCCGT CGGCACGCGC CGATCCGGGC ACCGGTCCTC GCGCCGCCGC CCGGTCCGGC
CACGGGACGA ACCCGGGGGC CGATCCACGT CGCCGTGCCG TCCTGCTCGG CGGCCTCGGG
CTGGCGGGCG CCGCGCTGGG CGGGGCGAGC CTGGCGGCCT GCGGCGGCTC CGGCGGTTCG
ATCCCGGCCC CCGCGCCGAC CCTGCGGGCA CCCACCCCGA TCGCGGGCGT CACCGACGGG
GTCTTCGGGC TCGGGGTCGC CAGCGGCGAC CCGTTGCCGG ACGGCGTCAT CCTCTGGACC
CGGCTCGCGC CGAGGCCGAC CGAGGGCGGC GGCATGCCCA CGCGGGACAT TGAGGTCGAC
TGGCAGATCG CGACGGACGA GGGTTTCCGC GATGTGGTGC GCGCCGGCAC GCAGACCGCG
CAGACGGCGT TCGCGCATTC CGTCCACGTC GACGTCCGCG GACTCGCGCC GGAGCGTGAC
TACTTCTACC GGTTCCGTGC CGGCACCGTG CTCAGTCCAG TCGGCCGGAC CCGGACGGCC
GCGGCACCTG GGAGGGGACC GGAATCGACC GGCGGTGCCC TGACCTTCGC GCTGGCCTCG
TGCCAGGACT TCCAGAACGG GTACTGGCCG GCCCTCGACG GCATCGCCAC CGACGCGCCG
GACCTCGTCG TCCACGTCGG CGACTACATC TACGAGTACG ACCCGAAAAG CAACTACCCG
GACCGGCGGC ACACCACCCC GCAGCGGCCC GGTCTGGACC AACTCCAGAC GCTGGCGGAC
TACCGCAACC GGTACGGCCA GTACAAGTCC GATCCTGCCC TGCAGGCCGC TCATCACGTG
GCCCCCTGGG TCGTCACCTG GGACGATCAC GAGGTCGAGA ACAACTACGC CGGACTGATC
GACGAGGCCG GCGACGCCGG GGAGCAACGG CAGGACCCTG CGGTGTTCGC CCGCCAGCGT
GCCGCCGCCT ACCAGGCGTA CTACGAACAC ATGCCGATCC GCGCGGAGCT GAATCCGGGA
TCGCCCGACA TGCGGATCTA CCGGCGGTTC GTGTTCGGGA ACCTGGTGAC GTTCAACGTC
ATGGACACCC GGCAGTACCG GACCCGGCAG CCCGGCGACT CCCCGCAGGG CATCGGGCTC
GCATCCCTGG GCCGGGACAA CACGGCCGGC ACGATGGCCG GCGCCGCCCA GGAACGCTGG
TTGCGCGACG GCCTGACCAC GTCGCGGACC CGCTGGAACG TCCTCGCCCA GCAGACGATG
ATGGCCCAGC TGAACGGGCA GCTACCCCTC GGCGAGGGAC CACGGCTGGC CAACCTGGAT
CAGAACGACG GGTACGGCCC CTACCGGACC CGGCTGCTGT CGGAGATCCG CGACAGCGGC
GTGCGCAACC CGGTGGTGCT CTCCGGTGAC ATCCACTGCG CCTGGGTAAA CGACCTCCGG
GTCGATTTCG ACCGGCCCGA GACGCCGGTC GTCGCGACGG AGTTCGTCTG CACCTCGATC
AGCTCGGCCT TCTTCCTCGT CAGCGAGGAC TTCATCCGGC AGAACAATGC CCGACTCAAC
CCGCATGTCC GGTATTTTCG CGGTGACCGG CGAGGTTACA CGCGCGTTCG CGTCACCCCG
GACGAATGGC GCGCGGACAT GCGGGTCGTC GCCGACATCG CCCATCGCCA CTCGCCCACG
TCCACGGATG CCACCTGGGT GGTCGAGAAC GGGCGGCCCG GCGCGCGGCC GGCCTGA
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| Protein sequence | MTRDAAAGSP RSRRFPRAPS PSAATGSPSA ATGQTGRPAG TDPSARADPG TGPRAAARSG
HGTNPGADPR RRAVLLGGLG LAGAALGGAS LAACGGSGGS IPAPAPTLRA PTPIAGVTDG
VFGLGVASGD PLPDGVILWT RLAPRPTEGG GMPTRDIEVD WQIATDEGFR DVVRAGTQTA
QTAFAHSVHV DVRGLAPERD YFYRFRAGTV LSPVGRTRTA AAPGRGPEST GGALTFALAS
CQDFQNGYWP ALDGIATDAP DLVVHVGDYI YEYDPKSNYP DRRHTTPQRP GLDQLQTLAD
YRNRYGQYKS DPALQAAHHV APWVVTWDDH EVENNYAGLI DEAGDAGEQR QDPAVFARQR
AAAYQAYYEH MPIRAELNPG SPDMRIYRRF VFGNLVTFNV MDTRQYRTRQ PGDSPQGIGL
ASLGRDNTAG TMAGAAQERW LRDGLTTSRT RWNVLAQQTM MAQLNGQLPL GEGPRLANLD
QNDGYGPYRT RLLSEIRDSG VRNPVVLSGD IHCAWVNDLR VDFDRPETPV VATEFVCTSI
SSAFFLVSED FIRQNNARLN PHVRYFRGDR RGYTRVRVTP DEWRADMRVV ADIAHRHSPT
STDATWVVEN GRPGARPA
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