Gene Francci3_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3798 
Symbol 
ID3905546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4551769 
End bp4552560 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content75% 
IMG OID637881124 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_482877 
Protein GI86742477 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00159012 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTGG GCTCCTTCAA CATCATGCAC GGCCTGTCGC TCACGGATGG GACGGTCGAG 
CCCGCCCGCT TCGCCGCGGC CGTCTCCGCT CTCGGCGTGG ACGTCCTCGG GCTCCAGGAG
GTCGATCTCG ACCAGCCACG ATCGGGTGGG CTGGACCTCG CCGCGGAGGC GGCGGCGATG
ATCGGAGCCG GCGACGACGA CTGGCGGTTC GTCCCCACCG TCTTCGGCAC GCCCGGCGTG
GGCTGGCGGC CGGCTGACGG GCAGCGCCGG GACGACGAGC CGGCGTACGG CATCGCTCTG
ATCAGCCGGC TGCCCGTCCG TGAGTGGCGA GTGATCGACC TCGGCCGGGC GCCGGTGCGG
TCCCCGATCG CGATACCGGG GGGTCCGGAC AGGCGGGGAC GTCTGATCAT GCTCGACGAC
GAGCCGCGGG CCGCGATCGC CGCGCGGGTG GAGTCGGCCG GGGGCCCGCT GACGGTGGTC
AACACCCATC TGTCGTTCGT GCCGGGGTGG AACGCCGTGC AGCTGCGCCG GCTGGCCCGC
CGGCTCGCGG ACGTCCCGGG GCCGCTGGTC CTGCTGGGCG ATCTGAACCT GCCCGGCCGG
CTACCGGCCG CGCTCACCCG CTGGCGCCGG TTGGCGGTGA CGCCCACCTA CCCCGCGCAC
TCCCCGCGGG TGCAGCTCGA CCATGTGCTG GCCCGCGGGC CGGTAGGCAG GATCATCGCC
GTGCAGGCCC GCCGCGTGCC CATCTCGGAT CACCTGGCGC TGTCCGTCGA CCTCGCCGAC
CCGCGGGCCT GA
 
Protein sequence
MRLGSFNIMH GLSLTDGTVE PARFAAAVSA LGVDVLGLQE VDLDQPRSGG LDLAAEAAAM 
IGAGDDDWRF VPTVFGTPGV GWRPADGQRR DDEPAYGIAL ISRLPVREWR VIDLGRAPVR
SPIAIPGGPD RRGRLIMLDD EPRAAIAARV ESAGGPLTVV NTHLSFVPGW NAVQLRRLAR
RLADVPGPLV LLGDLNLPGR LPAALTRWRR LAVTPTYPAH SPRVQLDHVL ARGPVGRIIA
VQARRVPISD HLALSVDLAD PRA