Gene Francci3_3775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3775 
Symbol 
ID3906059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4523958 
End bp4524419 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID637881101 
Producthypothetical protein 
Protein accessionYP_482855 
Protein GI86742455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00175201 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCCGTTCT CGGCTGAACC GCTCTCGCGG AAGGTCTTCC CGGTCACCGA TGGATCCGGC 
CAGCCGAGGA TCAAGGACTC TCGTACCTCT TGGCGTGCCG CCTGTTCGGG CCAGAGTCTT
CGCGTGATGC GCTGTCTTCC GGCGCGGGTC TGCATTAACT GGTCGGCACC CGCTATCGTG
GAGTTCAACG GGCAGGCCGA CGTCAATATG GCCTATCCTT GGTGGCGTAA CACCAAAGTC
CTCTCAAATC TCGGAGGTCG ACCCTTGGCA CGCCGTGCAC GACTCAGCTG GCCCCAGGAA
CGGCGCCAGG CGAGTGAGGT AGTTGTCCGT CGGGTCGACC CCGGTCGGGG CTGGACCCTG
GAACAGGCTC GTGACCTGCT ACGACAGGGA TACTCCGTCG AGCATGTGGC GGAACGCACC
GGGTTTCCGG AGCAGATGCT GAAAGTCGCC GAGGAGGACT GA
 
Protein sequence
MPFSAEPLSR KVFPVTDGSG QPRIKDSRTS WRAACSGQSL RVMRCLPARV CINWSAPAIV 
EFNGQADVNM AYPWWRNTKV LSNLGGRPLA RRARLSWPQE RRQASEVVVR RVDPGRGWTL
EQARDLLRQG YSVEHVAERT GFPEQMLKVA EED