| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3713 |
|---|
| Symbol | |
|---|
| ID | 3903814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4445932 |
|---|
| End bp | 4446786 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637881039 |
|---|
| Product | F0F1 ATP synthase subunit A |
|---|
| Protein accession | YP_482794 |
|---|
| Protein GI | 86742394 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGTCC TCGCCGACGA GGGCTTCGAA GGCCCCACCA AGGAGGTCTT CCAGACTCCG
CACTGGTTCG ATGTCGGGAT CGGCTCGGTC AATCTCTACC TCAACAAGGC CACCGCGCTC
ACGATCTTTG CTGCACTGTT TGTCGGTGTG ATCTTCTGGT TGGGATTCCG CCGAGCTAAA
ATCATACCTC GCGGCCTCCA GAACCTGTGC GAGTCGGCCT ACGACTTCAT CGATCTGCAG
ATCGCCCGGG GTGTCATCGG CGAGAAGGGC ACGAGGTACA CGCCCTACCT GCTCGTCCTG
TTCAGCTTCG TGTTGATCTG CAACGTGCTC GCGGTGGTGC CCGGGGCCCA GTTCCCGGCG
ACCTCGCGCA TCGCCGTCCC GATGGTTCTG GCGCTCGTCA CGTACGTGTT GTTCAACTAC
GCGGGCATCA AGGCCAACGG CGCCGGTCCG TACTTCAAGG AGATGATTGA CCCGGCTCCC
ACCGCGCCGC TGTGGATCCG CGTGCTCCTG GCGCCGATCG AGATTCTCTC GACCTTGATC
GTTCGGCCCT TCACGCTGGC GGTCCGGCTC TTCGCGAACA TGTTCGCCGG GCACATCCTG
CTGCTGGTCT TCTCGCTGGG CGCGGACTAC CTGCTGCCCA AGCCCCCCTA TGTGTTCGGC
GCCGCCTCAC TGCTGGTGGC GATCATCCTC ACGGCGTTCG AGCTTGTCAT CGACGCTCTC
CAGGCGTACA TCATCACGAT CCTCACAGCC GCCTACATCG GCGGTGCGAT GGTGCACGGA
GAGCACGAGG TAGCTCCGTC CGAGGAACTC GCCTCGCCTG CTCCGGCGGG CGTGCCGGTA
TCGGCCCGGG CCTAG
|
|---|
| Protein sequence | MPVLADEGFE GPTKEVFQTP HWFDVGIGSV NLYLNKATAL TIFAALFVGV IFWLGFRRAK
IIPRGLQNLC ESAYDFIDLQ IARGVIGEKG TRYTPYLLVL FSFVLICNVL AVVPGAQFPA
TSRIAVPMVL ALVTYVLFNY AGIKANGAGP YFKEMIDPAP TAPLWIRVLL APIEILSTLI
VRPFTLAVRL FANMFAGHIL LLVFSLGADY LLPKPPYVFG AASLLVAIIL TAFELVIDAL
QAYIITILTA AYIGGAMVHG EHEVAPSEEL ASPAPAGVPV SARA
|
|---|
| |