Gene Francci3_3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3686 
Symbol 
ID3905370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4422459 
End bp4422989 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content73% 
IMG OID637881012 
Producthypothetical protein 
Protein accessionYP_482767 
Protein GI86742367 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.949248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.863338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA TCGACGACCC CGCGACGCTG GCCGACGACC TGGTGCGGGA GCTTGGTCTC 
GAAGAACATC CCGAGGGCGG CTGGTACCGC CGGACCTGGG CCAGTCCCGA CCAGATCGAC
GCACATGGCG GCAGGCGCCC CGTCATGACG TCCATCCTGT TCCTGCTGCG TCCGGGAGAG
GTGTCCGGCT GGCATCGGGT GGCCTCGGCC GAGATCTGGC TCTGGCAGGG CGGCGGGGCC
CTCGATCTCA CTCTCGGCGG GCCGGGCCGG GCGCCGGTCG CCGCCGACCG GCGGATCCTC
GGGCCCGATC TGGCCGCGGG CCAAGCGCCG CAGCTCGTCG TGCCGGCCGG CGAATGGCAG
ACCGCGGTCC CGCGCGATGG ACAGCACGTC CTGGTCGGCT GCGTGGTGGC GCCTGGCTTC
GACTTTCTGG ACTTCGAGCT CTTCCCCGCA TCAGGCGCCG TTCGGGGCGG CCCGGTCAGG
TCAGCTCGGG GCGGTCATCG CGGTGGTGAG CGCGGCTGCC GCGGCGACTA G
 
Protein sequence
MTRIDDPATL ADDLVRELGL EEHPEGGWYR RTWASPDQID AHGGRRPVMT SILFLLRPGE 
VSGWHRVASA EIWLWQGGGA LDLTLGGPGR APVAADRRIL GPDLAAGQAP QLVVPAGEWQ
TAVPRDGQHV LVGCVVAPGF DFLDFELFPA SGAVRGGPVR SARGGHRGGE RGCRGD