Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3686 |
Symbol | |
ID | 3905370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4422459 |
End bp | 4422989 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881012 |
Product | hypothetical protein |
Protein accession | YP_482767 |
Protein GI | 86742367 |
COG category | [S] Function unknown |
COG ID | [COG3542] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.949248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.863338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA TCGACGACCC CGCGACGCTG GCCGACGACC TGGTGCGGGA GCTTGGTCTC GAAGAACATC CCGAGGGCGG CTGGTACCGC CGGACCTGGG CCAGTCCCGA CCAGATCGAC GCACATGGCG GCAGGCGCCC CGTCATGACG TCCATCCTGT TCCTGCTGCG TCCGGGAGAG GTGTCCGGCT GGCATCGGGT GGCCTCGGCC GAGATCTGGC TCTGGCAGGG CGGCGGGGCC CTCGATCTCA CTCTCGGCGG GCCGGGCCGG GCGCCGGTCG CCGCCGACCG GCGGATCCTC GGGCCCGATC TGGCCGCGGG CCAAGCGCCG CAGCTCGTCG TGCCGGCCGG CGAATGGCAG ACCGCGGTCC CGCGCGATGG ACAGCACGTC CTGGTCGGCT GCGTGGTGGC GCCTGGCTTC GACTTTCTGG ACTTCGAGCT CTTCCCCGCA TCAGGCGCCG TTCGGGGCGG CCCGGTCAGG TCAGCTCGGG GCGGTCATCG CGGTGGTGAG CGCGGCTGCC GCGGCGACTA G
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Protein sequence | MTRIDDPATL ADDLVRELGL EEHPEGGWYR RTWASPDQID AHGGRRPVMT SILFLLRPGE VSGWHRVASA EIWLWQGGGA LDLTLGGPGR APVAADRRIL GPDLAAGQAP QLVVPAGEWQ TAVPRDGQHV LVGCVVAPGF DFLDFELFPA SGAVRGGPVR SARGGHRGGE RGCRGD
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