Gene Francci3_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3593 
Symbol 
ID3904147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4291866 
End bp4292099 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content67% 
IMG OID637880914 
Producthypothetical protein 
Protein accessionYP_482674 
Protein GI86742274 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGAGG CGGCCCTCGA ACATCTCGTG CGAGGCATCG TCGATCACCC CGACGACGTC 
CGGGTGGACC TGAACAACGG TCGGCGTGGA CGCACCCTGG AGGTTCGGGT GCACCCCGAA
GATCTCGGGA AGGTCATCGG TCGGCGAGGT CGTACCGCTC GTGCGCTGCG CACGGTGATG
GGTGGTGTCG GAGGCCGGGG CCTTCGGATC GACGTCGTCG ATGTGGATCG TTAG
 
Protein sequence
MLEAALEHLV RGIVDHPDDV RVDLNNGRRG RTLEVRVHPE DLGKVIGRRG RTARALRTVM 
GGVGGRGLRI DVVDVDR