| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3573 |
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| Symbol | ispG |
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| ID | 3904512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4270849 |
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| End bp | 4272003 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637880894 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_482654 |
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| Protein GI | 86742254 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTAA CTCTGGGCAT GCCAACCGCT CCGGCCCGTC CGCTCGGCAC GCGGCGGCAC
AGCCGGCAGA TCCACGTGGG CAACGTCCTG GTCGGGGGTG ACGCTCCGGT CTCCGTTCAG
TCGATGTGCA CCACGTTGAC GTCGGACGTC AACGCCACGC TGCAGCAGAT CGCACAGCTG
ACAGCGTCGG GATGCCAGAT CGTCCGGGTC GCGGTGCCAA GCCAGGACGA CGCCGACGCC
CTCGCCGCGA TCGCCCGCAA GTCCCCGATC CCGGTGATTG CCGATATCCA CTTCCAGCCC
AAGTACGTCT TCGCCGCGAT CGACGCGGGC TGCGCCGCGG TCCGGGTCAA CCCCGGCAAC
ATCAAGGCTT TTGACGACAA GGTCGGGGAG ATTGCTCGCG CGGCGAAGGC CGCCGGCGTT
CCGATCCGGA TCGGGGTCAA CGCGGGTTCA CTCGACAAGC GGCTGTTGGC GAAGTACGGC
AAGGCCACGC CGGAGGCGCT GACGGAGTCG GCCTTGTGGG AATGCTCGCT GTTCGAGGAG
CACGACTTCC GTGACATCAA GATCTCGGTG AAGCACCACG ACCCGGTCGT CATGATCCAG
GCGTACCGGC TGCTCGCCCA GGCCTGCGAC TACCCGCTGC ACCTCGGTGT CACCGAGGCC
GGACCGTCCT TCCAGGGCAC GGTCAAGTCC GCGGTCGCCT TCGGGGCCCT GCTCGCCGAG
GGAATCGGTG ACACGATCAG GGTGTCGCTG TCGGCACCGC CGGTCGAGGA GGTGAAGGTC
GGCACCGCGA TCCTGGAGTC CCTGGGACTT CGGCAGCGTA AGCTCGAAAT CGTATCCTGC
CCTTCCTGCG GTCGGGCTCA GGTCGATGTC TACACCCTTG CCAATCAGGT CAGCGCCGGT
CTCGAGGGCA TGGAGGTCCC GTTGCGCGTC GCCGTCATGG GCTGCGTCGT GAACGGGCCG
GGCGAGGCCA GGGAGGCCGA TCTCGGCGTC GCATCCGGGA ACGGCAAGGG TCAGATCTTC
GTCCGAGGTG AGGTCGTGAA GACCGTTCCG GAGGCGCAGA TCGTGGAAAC CCTCATTGAG
GAAGCCATGC GGCTGGCCGA GGAGATGGCG GCGGACGGCA CCCCGTCCGG CGAACCCTCG
GTTTCCGTGG GTTAA
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| Protein sequence | MTVTLGMPTA PARPLGTRRH SRQIHVGNVL VGGDAPVSVQ SMCTTLTSDV NATLQQIAQL
TASGCQIVRV AVPSQDDADA LAAIARKSPI PVIADIHFQP KYVFAAIDAG CAAVRVNPGN
IKAFDDKVGE IARAAKAAGV PIRIGVNAGS LDKRLLAKYG KATPEALTES ALWECSLFEE
HDFRDIKISV KHHDPVVMIQ AYRLLAQACD YPLHLGVTEA GPSFQGTVKS AVAFGALLAE
GIGDTIRVSL SAPPVEEVKV GTAILESLGL RQRKLEIVSC PSCGRAQVDV YTLANQVSAG
LEGMEVPLRV AVMGCVVNGP GEAREADLGV ASGNGKGQIF VRGEVVKTVP EAQIVETLIE
EAMRLAEEMA ADGTPSGEPS VSVG
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