| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3554 |
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| Symbol | |
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| ID | 3904493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4250360 |
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| End bp | 4251763 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637880875 |
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| Product | processing peptidase |
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| Protein accession | YP_482635 |
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| Protein GI | 86742235 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.106365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.417448 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGACA CTCCCACGCC CGACCTGACC TGCTCAGCGG GGACCGCCGG CGCGCCGCGG
AACAAGCCGG TTCCCGGCGC CCGGGCCGCG CACCTGCTCG CTGCTGGCGG AGTCAGTGGC
GAATCGTTGC TGGACGGCAC GGCGCGCCGC ACCGTGCTCC CCGGCGGTCT GCGGGTCATC
ACCGAGCGGG TCCCCGGGGT GCGCTCGGTC GCGATCGGCG TCTGGGTCGC GGTGGGCTCG
CGCGACGAGA CGCCGGTGAC CGCCGGATGC TCCCACTACC TGGAGCACCT GCTGTTCAAG
GGCACGCCCA GCCGGGACGC GTTGACTATC AGCGCGTCGG TCGAGGCGGT CGGCGGGGAC
ATCAACGCCT TCACCGGCAA GGAGTACACC TGCTACTACG TGCGGGTGCT CGACTCCGAT
CTCGCGATGG CCGTCAACGT CATCGCCGAC ATGGTCACCA ACTCGCTGGT GACAGCCGAC
GACGTCGAGG CCGAGCGTGG CGTGATCCTG GAGGAGATCG CCATGTACGA GGACGACCCG
GGTGACCTCG TCCATGACGT ATTCGCGGCG GCGATGCTCG GGTCGTCGGT ACTCGGCCGC
CCGGTGCTCG GGACGACCGA GTCGATCGAG GGGCTGGGCC GGGAGACCAT CGCGGACTAC
TACCGCTCCC GGTACGTCCC GCCGGCGATG GTGGTCTCCA TCGCCGGCAA CCTGGCGCAC
GACCGGGCGC TGGCGCTGGT CGCCGAGGCG TTCGCCGACC GTCTGACGGT GAGCGCCGAG
CCGTTCGAGG TGCGTGGCGG ATCGTACGAC TACCCGCCGC CGCCCGGCAT CGTCGTGACC
GACCGGCCGA CCGAGCAGGC GCATCTCGTG CTCGGCACCA GGGGACTGTC CCGGCACGAT
CCGCGCCGTT ACACGCTCGG CGTGCTGTCG ACGGCGCTGG GCGGTGGGAT GAGCTCGCGG
CTGTTCCAGG AGATCCGGGA GAAGCGGGGG CTGGCGTACT CGGTGGGCTC GTTCGCCTCC
CACTTCGCCG ACGCGGGCCT GTTCGGCGTC TATGCCGGAT GCGCCCCCAA GCGTGCCGAC
GTGGTCCTCG AGCTCGCCCG TGAGCAGGTA CGCCAGATCG CCGAGCACGG GATCAGTGCC
GAGGAACTCG ACCGGGCCCG TGGGCAGAAC CGCGGCTCGA TGATCCTCGG CTTGGAGGAC
ACCGGATCCC GGATGAGCCG CCTCGGCAAG AGCGAGCTCG TCCACGGTGA GGTCCTGTCG
GTCGACGAGA TCATCGCCCG GGTGGACGCG GTCACCCTCG ACGATGTCAC CGCGATCGCG
CGGGAGCTGC TGGACCAGTC CTGGGCCCTG GGCGTCATCG GACCCTTCGA CGACCACGAC
TTCAGCGCCG CCGTCGCCCG TTAG
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| Protein sequence | MSDTPTPDLT CSAGTAGAPR NKPVPGARAA HLLAAGGVSG ESLLDGTARR TVLPGGLRVI
TERVPGVRSV AIGVWVAVGS RDETPVTAGC SHYLEHLLFK GTPSRDALTI SASVEAVGGD
INAFTGKEYT CYYVRVLDSD LAMAVNVIAD MVTNSLVTAD DVEAERGVIL EEIAMYEDDP
GDLVHDVFAA AMLGSSVLGR PVLGTTESIE GLGRETIADY YRSRYVPPAM VVSIAGNLAH
DRALALVAEA FADRLTVSAE PFEVRGGSYD YPPPPGIVVT DRPTEQAHLV LGTRGLSRHD
PRRYTLGVLS TALGGGMSSR LFQEIREKRG LAYSVGSFAS HFADAGLFGV YAGCAPKRAD
VVLELAREQV RQIAEHGISA EELDRARGQN RGSMILGLED TGSRMSRLGK SELVHGEVLS
VDEIIARVDA VTLDDVTAIA RELLDQSWAL GVIGPFDDHD FSAAVAR
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