Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3553 |
Symbol | |
ID | 3904492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4249506 |
End bp | 4250240 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637880874 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_482634 |
Protein GI | 228965401 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.460519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.378798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGGTGC TCGGTGCACG GGGACGGATG GGGTCGACGG TGTGTGCCGC CGTCGAGGCC GCCGCCGACC TGGCGCTGGT CGCGGCCCTC GGCACCGGCG ATGACCGTGG TGCGCTCGCC GCGGCCGACG TCGTCGTCGA CTTCACCACC CCCGACGCGG TGATGGACAA CCTCCGCTGG TGCGTCCAGG CCGGCAAGCA CGTCGTCGTC GGCACCACCG GCTTCGACGA GCCGCGGCTC GCGACCCTGC GTGGCTGGCT GGCCGCGGCA CCGGGGGTCG GGGTGCTCGT CGCGCCGAAC TTCGGGGTAG CCGCCGTGCT GATGATGACG TTCGCCGCCC GGGCCGCCCG GTTCTTCGAC TCGGTGGAGA TCATCGAGTT GCACCATCCC GGCAAGGCCG ACGCGCCGAG CGGCACCGCC CGGCGTACCG CGCAGCTGGT CGCCGCGGCG CGTACCACCG CCGGGTTGCC GGTGGCCGGC CCGGACGCGA CAACCGCCGC CCTCGACGGT GCCCGCGGCG CCCGGGTCGA CGGCGTGCCG GTGCATGCCG TCCGCCTCGC CGGGCTCGTC GCGCATCAGG AGGTCCTGCT CGGGGGCGCC GGGGAGACCC TCACCCTGCG ACACGATTCC TACGACCGCA CCTCGTTCAT GCCGGGGGTG CTGCTAAGCG TGCGGAAGGT CGGCGAGCGA CCGGGACTCA CGGTCGGTCT GGAGTCGCTG CTCGACCTGG ACTAG
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Protein sequence | MGVLGARGRM GSTVCAAVEA AADLALVAAL GTGDDRGALA AADVVVDFTT PDAVMDNLRW CVQAGKHVVV GTTGFDEPRL ATLRGWLAAA PGVGVLVAPN FGVAAVLMMT FAARAARFFD SVEIIELHHP GKADAPSGTA RRTAQLVAAA RTTAGLPVAG PDATTAALDG ARGARVDGVP VHAVRLAGLV AHQEVLLGGA GETLTLRHDS YDRTSFMPGV LLSVRKVGER PGLTVGLESL LDLD
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