Gene Francci3_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3552 
Symbol 
ID3904491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4248719 
End bp4249219 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content73% 
IMG OID637880873 
Producthypothetical protein 
Protein accessionYP_482633 
Protein GI86742233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.497079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.345074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGCCC GGTGGCTGGT GGCCGTGCTC GTCGCGGCGT GTGGCTTCTA CCTCGGGCTG 
ATCGGGTGGC GGGGAATCCA GTTGCTCGGC GACGATCGCT GGGCGGCCCG TGGACTCGGT
CTCGGTGTCG TGCTGCTTCC GATGATCGGC GCCGTCGTCA TCCTGCGTGA GCTGCGTTTC
GGCCGCGACA CCGAGCGGCT TGCCCGGATG TTCGACGTAG CCGCGGATGC GACGGCTGAC
GTCGAGTCCG GCACCGCCCG CGGCTTCGAC CCCGGCGCCC GTGCCGACGA GCCGGTTCTC
GTGCGCCGGC CGTCGGGCCG GATCGACCGC GCCTCGGCCG ACGCCGCGTT CGCCCAGCGT
CGGGCGGAGG TCGAGGCGGC GCCGGGTGAA TGGCGTCGCT GGTACCGGCT CGCGGTCTCC
TATGGAGATG CCGGGGACAC CCGCCGGGGA CGCGCCGCGA TGCGTCACGC GATCGTCCTT
GAGCGGCACT CCCGCGGGTG A
 
Protein sequence
MRARWLVAVL VAACGFYLGL IGWRGIQLLG DDRWAARGLG LGVVLLPMIG AVVILRELRF 
GRDTERLARM FDVAADATAD VESGTARGFD PGARADEPVL VRRPSGRIDR ASADAAFAQR
RAEVEAAPGE WRRWYRLAVS YGDAGDTRRG RAAMRHAIVL ERHSRG