| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3547 |
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| Symbol | thyX |
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| ID | 3904486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4241052 |
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| End bp | 4241849 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637880868 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_482628 |
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| Protein GI | 86742228 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.583534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.337603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAGG TGGCAGTGTC GCAGCCGACG TCCGAACCGA CGTCCGAACC GACGTCCGTG
CGGCTTCGGG TCCAGGTGAT CGCCAAGACC GAGTTCATCC CCCCGGACGA CGTGGCCTGG
AGCACCGACG CCGACGGCGG TCAGGCCCTC GCCGAGTTCG CCGGGCGGGC CTGCTACCAG
AGCTGGAACA AGCCGAATCC GGCGACCGCG ACCAACGCCG GCTACCTACG GCACATTCTC
GACGTCGGGC ATCTGTCCGT GCTCGAGCAC GGGACCGTAT CGCTCTATCT CACCGGGGTG
TCGCGCAGCC TCACCCATGA GCTGGTCCGG CACCGGCACT TCTCCTACAG CCAGCTCTCC
CAGCGCTACG TCCCCGAGCG GGACGCCGCC GTGGTGGAAC CGGAGGTCAT CGCGGCCGAT
CCGGAGCTGC ACGCCCTGTT CCAACAGGCC GCGGCGGCCT CGCTGGAGGC CTACGGGCGC
CTGTTGGAAG GTCTGGAGAA GCGGTTCGCC GACGTTTCCG CGCCCATCTC ACGGCGCAAG
CAGGCGCGCC AGGCGGCCCG GTCGGTGCTG ATGAACGCGA CCGAGACCCG GATCGTGGTC
ACCGGGAACT ACCGGGCGTG GCGGCACTTC ATCGGGATGC GGGCGAGTGA GCATGCCGAC
GTGGAGATCC GCGGGCTTGC CGTCGCCGTC CTGCGGGAAC TGCTCCGGGT GGCGCCCAAC
GTGTTCGCCG ACTTCCGGAT CTCGACGCTG GATGACGGCA CCGAGGTCGC CTCCAGCCCG
CTGGTGGGGG AGGGCTGA
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| Protein sequence | MMEVAVSQPT SEPTSEPTSV RLRVQVIAKT EFIPPDDVAW STDADGGQAL AEFAGRACYQ
SWNKPNPATA TNAGYLRHIL DVGHLSVLEH GTVSLYLTGV SRSLTHELVR HRHFSYSQLS
QRYVPERDAA VVEPEVIAAD PELHALFQQA AAASLEAYGR LLEGLEKRFA DVSAPISRRK
QARQAARSVL MNATETRIVV TGNYRAWRHF IGMRASEHAD VEIRGLAVAV LRELLRVAPN
VFADFRISTL DDGTEVASSP LVGEG
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