| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3518 |
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| Symbol | |
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| ID | 3905252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4201727 |
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| End bp | 4203349 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880840 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_482600 |
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| Protein GI | 86742200 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.964961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.270769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGCC GCAGCTACGA GGTCCGCACG TTCGGGTGCC AGATGAACGT CCACGACTCC
GAACGGCTCT GTGGGCTGCT GGAATCCGCC GGCTACTCCC CGGTCGATCC CGGCGGCGAG
GCGGATGTGG TCGTGTTCAA CACCTGCGCG GTGCGGGAGA ACGCCGACAA CCGCCTGTAC
GGCAACCTCG GCCAGCTAGT CCCGGTGAAG AAGGGCCATC CGGGCATGCA GATCGCGGTC
GGGGGCTGCC TCGCCCAGAA GGACCGGGCC GCGATCCTCG ACCGGGCGCC CTGGGTTGAC
GTGGTCTTCG GCACGCACAA CCTGCACCGA CTGCCCGTGC TGCTGGAGCG CGCGCGGCAC
AACGCGGCGG CCCAGGTCGA GATCGCCGAG GCCCTGGAGG TCTTCCCGAG CTCCCTGCCG
ACCCGGCGGG CCAGCCATCA CTCGGCCTGG GTCAGCATCA GCGTGGGATG TGACAACACC
TGCACCTTCT GCATCGTCCC CAGCCTGCGT GGCCGCGAGC GTGACCGCCG GCCGGGCGAC
GTGCTCGCCG AGGTCGAGGC CCTGGTCGCG GAGGGCGCCC TGGAGATCAC ACTGCTGGGA
CAGAACGTCA ACTCCTACGG GCGCTCGCTG GGCGATCCCG GTGCCTTCGC GAAGCTGCTG
GCCGCCTGCG GTCGCGTCGA CGGTCTCGAA CGTGTCCGAT TCACCTCACC GCATCCGCGC
GACTTCACCG ACGACGTCAT CGAGGCCATG GCGACCACCT CGAACGTGTG CCACCAGCTG
CACATGCCGT TGCAGTCCGG GTCGGACACC GTGCTGCGCC GCATGCGCCG CTCGTACCGT
CGGGACCGTT TCCTCGGCAT TGTCGAGCGG GTGCGGGCGG CCATGCCCGA CGCGGCCATC
ACCACCGACA TCATCGTCGG CTTCCCTGGC GAGACCGAGG CGGACTTCGC CGATACCCTC
GACGTGGTGC GGGCGGCCCG GTTCTCCGGC GCCTTCACCT TCCAGTACTC GCCTCGCCCG
GGCACCCCGG CAGCGACCAT GGACGCCCAG GTGGACCGGG CGACCGTGGC CGACCGGTAT
ACCCGGCTGG TGGCCCTGCA GGACGAGATC TCCTGGGCGG AGAACCGGGC CCTGGTCGGC
CGGCGGGTCG AGGTGCTGGT CTCGGAGGGG GAGGGGCGCA AGGACGGCGC CACCGGCCGG
ATGTCCGGCC GGGCTCGGGA CGGACGGCTC GTGCACTTCC GCGCGGACGA GGCCGCGAGC
TCGTCCACCG GCTCGGGCCC GAGGGCGGGC GGCGCCGCGC CCGCGGTCGC GGTGGCGGTC
GCGCCTACGG TGCGCCCGGG CGACGTCGTC GAGACGGTGG TGACGCGGGC AGCACCCCAT
CACCTCACCG CCGACGGCCC CCTGCGGTCC CACCGGGCGA CCCGTGCGGG GGACGCGTGG
GCGCTCGGGC GTGACGGTGA CGGTGGCGGT GCGGCAGCCG CGCAGCAGCC GGCAGACGGA
CGGCCGATCG TCACCCTGGG CATCCCGTCC CTGCGGCCGT CCTCGCCCGA TCCCGTCGGC
CCGGCGTCGG CCGACGCGGC GTCGGCCGGC GCGGACGCCT GCTGTACTCC GGTACGTCGA
TGA
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| Protein sequence | MNGRSYEVRT FGCQMNVHDS ERLCGLLESA GYSPVDPGGE ADVVVFNTCA VRENADNRLY
GNLGQLVPVK KGHPGMQIAV GGCLAQKDRA AILDRAPWVD VVFGTHNLHR LPVLLERARH
NAAAQVEIAE ALEVFPSSLP TRRASHHSAW VSISVGCDNT CTFCIVPSLR GRERDRRPGD
VLAEVEALVA EGALEITLLG QNVNSYGRSL GDPGAFAKLL AACGRVDGLE RVRFTSPHPR
DFTDDVIEAM ATTSNVCHQL HMPLQSGSDT VLRRMRRSYR RDRFLGIVER VRAAMPDAAI
TTDIIVGFPG ETEADFADTL DVVRAARFSG AFTFQYSPRP GTPAATMDAQ VDRATVADRY
TRLVALQDEI SWAENRALVG RRVEVLVSEG EGRKDGATGR MSGRARDGRL VHFRADEAAS
SSTGSGPRAG GAAPAVAVAV APTVRPGDVV ETVVTRAAPH HLTADGPLRS HRATRAGDAW
ALGRDGDGGG AAAAQQPADG RPIVTLGIPS LRPSSPDPVG PASADAASAG ADACCTPVRR
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