| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3486 |
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| Symbol | |
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| ID | 3905220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4155527 |
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| End bp | 4156879 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880808 |
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| Product | major facilitator transporter |
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| Protein accession | YP_482568 |
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| Protein GI | 86742168 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.719238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC AGATGGAGAA GGTAGCCGGT TCGGCATCGA AGGCGACAGG TGGCACGTTC
GCTGCCCTGC GGGTGCCGAA CTTCCGGCTC TTCCTCGGCG GCCAGATCGT TTCACTCTGC
GGGACATGGA TGCAGACCAT CGCCCTCGGC TGGCTGGTCC TCTCGCTCGG CGCCTCCGGC
ACGGCGCTCG GCCTGGTCAC CGCCGCCCAG TTCCTGCCGG TGCTGTTCTT CGGGCCCTAC
GGCGGTCTGC TCGCCGACCG GACGGACCGG CGCCGCCTGC TGATCTGCAC GCAGGTGGGC
TCCGGACTCG CCGCGCTGGC ACTGGGCATC CTCGACCTCA CCGGTACGGC CCAACTCTGG
ATGGTCGGGG TGGCCGCCGC GCTCATCGGC CTGTGCAACG CCATTGACAA CCCGGCCCGG
CAGAGCTTCG TCCAGGAGAT GGTCGGGCCG GAGCACCTTC CGAACGCGGT CACCCTGAAC
TCGGTCGCGA TAAACGCGGC GCGCATCGTC GGCCCGGCGA TCGCCGGCGT CGTCATCGTG
CTCGCGGGCA CCGCCGGCTG TTTCCTCATC AACGCGGCCT CCTTCGGCGC GGTCCTGTTC
GCCCTGCACC GCATGGACAT CTCAGCGCTG TATGATCATC CGCCGATACA CCGGGCGCCG
GGGCAGCTGC GGGCCGGCTT CGCCTACGTG CGCCGCACGC CGGCGCTGCG CGTACCGTTG
GTCATGATGG TGATGATCGG CACGCTGTCC TACGAGTTCC AGGTCGTGCT GCCGCTCCTG
GCCCGGGAGA CCTTCGGGGG CACCGCGGCC ACGTACAGCC TGATGACCTC GGCCATGGGG
GCGGGCGCGG TCGTCGGCGG CCTGCTGGTC GCCCGCCGCC GCCGGATCGG GCCCCGAGCG
CTGAGCCTGA CCGCGATGAC CTTCGGTGTC ATCCTGCTGC TCGCCGCCGC CGCGCCGACG
CTGCCACTCG AGATCGCGAC GATGGTGCTG CTGGGCGCGA CGAGCGTCGC CTTCATCTCG
ACCGGGAACG CCACGGTCCA GCTCTCGGCC GACCCGGCGA TGCGTGGGCG GGTGATGGCG
CTGTGGTCGG TCGCGTTCCT CGGCACAACG CCGGTCGGCG GCCCGATCGC CGGCTGGGTC
GCCCAGGCCT TCGGCGCGCG CGCCGGGTTG CTCCTGGCCG CGGGTGCGGC CATCGGCGCG
GCGTTGTACG CCTTCGGCTC CCTTCGGGCC ACGGCCGTGA AAGGCATGGC CGTGAAAGGC
ATGGCCATGA AGGGCACGGC CATGAAGGGC ACGCGCCCGG ACCCGGGTCG GCTCAGTCCG
ATCCGGCCCC GGGTGCCGCC TCGGCGGGGC TGA
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| Protein sequence | MTLQMEKVAG SASKATGGTF AALRVPNFRL FLGGQIVSLC GTWMQTIALG WLVLSLGASG
TALGLVTAAQ FLPVLFFGPY GGLLADRTDR RRLLICTQVG SGLAALALGI LDLTGTAQLW
MVGVAAALIG LCNAIDNPAR QSFVQEMVGP EHLPNAVTLN SVAINAARIV GPAIAGVVIV
LAGTAGCFLI NAASFGAVLF ALHRMDISAL YDHPPIHRAP GQLRAGFAYV RRTPALRVPL
VMMVMIGTLS YEFQVVLPLL ARETFGGTAA TYSLMTSAMG AGAVVGGLLV ARRRRIGPRA
LSLTAMTFGV ILLLAAAAPT LPLEIATMVL LGATSVAFIS TGNATVQLSA DPAMRGRVMA
LWSVAFLGTT PVGGPIAGWV AQAFGARAGL LLAAGAAIGA ALYAFGSLRA TAVKGMAVKG
MAMKGTAMKG TRPDPGRLSP IRPRVPPRRG
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